Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_1024 |
Symbol | |
ID | 6353726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 1127811 |
End bp | 1129004 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642668647 |
Product | putative iron complex transport system substrate-binding protein |
Protein accession | YP_001943078 |
Protein GI | 189346549 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.264421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC AGATGAGATT CGTTTCATTC CGGATCATGC GGGCAGTACT GGTGACGGTA CTGCCCCTTC TGCTGCTGGC GGGGTGCCGG CAGGAGCGGG AACGGCCGGT CAGAAGGGCT GCGAAGAGGG ACGTGGAGCA GGAAATTCCC CTGCGTTACG CCCGCCGTTT TACCATGAAA AAGGTTGGTT CCTGTACCCT CATCGAGATC AGGAAGCCGA AGGGGGCCAG GCTCGGGGTG TTCTATCGCT ATCTGCTCGT TCCCGAAGGA GAAACCGCGC CTTCCGGGTA TCCTGACGCC CTGGTTGTGG CTACTCCTGT CAGGAAAGTA ACCTGCGGTC TGGGGCTGCA GGTAGCCATG ATCGGGCAGC TCGACCGGAT TGAAAGCATA GCGGGGGTGG GCATGGGGAA GTGGACGGGA AACCCTGAGA TCCGCCGGAA GATGGCTGCC GGAGAGGTGC TCGAGACGGG CATGTCCGCC GATATGAACA TGGAGGCCAT GGTGAGCATC GACCCTGATA TCGCCTTCGT CTACTCGTCG GGAAGCGATA CCGACATCCA TGACAAACTG CTTTCGATGG GCATCAGGCC GGGGCTGGTG TGCATGCACC TCGAGGAGCA TCCTCTCGGC GTTCTGGAGT GGATACGGTT TTTCGGTGCG TTTTATGGCA GGGAGAAGGA GGCGGAGGCC TGTTTCAGGA GCGCAGCGGA ACGTTATGAA AAACTCGAAA CATCGGTGAA GGATTCTTTC AGCGTGTGTC CGACGGTTAT TGTCGGCCAC GCCACCAGAG GCATCTGGAC CACGCATGGT TCGAGCGCAT GGTTCATCAG GTTCCTGCAC GACGCAGGAG CGCGCTACAT ACTCGAAGAG AGCGGCGAAT ACGAAGAGAA TCCGGTCAGT CTCGAACACG CCCTCAAGGT CGGCATCGAA GCCGAATACT GGGTCAATCC CCGGTACAAT GCGAAAACCA TTACCGACCT GCTTGGCGAT GACAAGCGCT ATCAGTATTT CTCTTCGGTC AAATTCGGCA AGGTGTTCAA CAACGATAAC CTCACCTTCG ACGACGGACG GACGCTGTTC TGGGAGACGG GCATGATGGA ACCGGACGAA GTGCTCAGGG ATCTCGTCGC GATTTTTCAT CCCGGGCTGG TTCCGGGGCA TCGAATGAAA TACTATCGCA GGATGATGCG CTGA
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Protein sequence | MEKQMRFVSF RIMRAVLVTV LPLLLLAGCR QERERPVRRA AKRDVEQEIP LRYARRFTMK KVGSCTLIEI RKPKGARLGV FYRYLLVPEG ETAPSGYPDA LVVATPVRKV TCGLGLQVAM IGQLDRIESI AGVGMGKWTG NPEIRRKMAA GEVLETGMSA DMNMEAMVSI DPDIAFVYSS GSDTDIHDKL LSMGIRPGLV CMHLEEHPLG VLEWIRFFGA FYGREKEAEA CFRSAAERYE KLETSVKDSF SVCPTVIVGH ATRGIWTTHG SSAWFIRFLH DAGARYILEE SGEYEENPVS LEHALKVGIE AEYWVNPRYN AKTITDLLGD DKRYQYFSSV KFGKVFNNDN LTFDDGRTLF WETGMMEPDE VLRDLVAIFH PGLVPGHRMK YYRRMMR
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