Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0994 |
Symbol | |
ID | 6355443 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 1085036 |
End bp | 1086310 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642668618 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_001943049 |
Protein GI | 189346520 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAAT CGCCACTGGT TATTCTCCTT CTTACCGTTA TGCTCGATCT GATCGGGTTC GGCATTGTGC TGCCGCTGCT GCCGACCTAC GCAAAAGATC TCGGCGCCAG TCCCTTCATG ATCGGTCTCA TTGCCGCGAT ATTCTCCATC ATGCAGTTCA TCTTCTCCCC GCTCTGGGGC AAGCTGAGCG ACAAGATCGG ACGCAGGCCG GTTATGCTTA TCAGCATATT CGTTACGGCA CTCTCCTATC TGATTTTTTC CCAGTCCGAT ACCATTCTGC TTCTGATTTT CGCAAGAGGA CTTTCAGGCA TCGGCTCGGC CAATATCGCC GCCGCGCAGG CATACATTAC CGATGTGACC GACAGCAAAA GCCGCTCGGG GGCCATGGGC ATGATCGGCG CGGCGTTCGG CGTAGGATTC ATTATCGGCC CCCTTGTCGG CGGCCTGCTC AAGCATAACT ATGGCATAGA AATGGTCGGG TACGTTGCTT CGGCCCTTAT ATTCTTCGAT TTCATTCTTG CCATATTCTT TCTGCCGGAA TCCAACAAAC AGGCAAAAAA GTTCAATCTC GGCATGTTCA GCGGCAAAAG CGCGGCCAGT GGCAGTGCAA ACGGCAGCTC GTCCTCGTTT CTGAAAGAGA AGATTACGGA ATATGTCGAT GGCCTGAAGC TGACGTTCAG TTCGAAGCCG CTCGCTCTGC TGATGATCGC AAACTACATA TTCACCTTCG CCATCGTCAA CATGCAGGTT GCTTCTATCC TGCTCTGGAA GGAGTATTTC GGTGCTTCCG ATCAGGAGAT CGGCTATATT TTTGCCTATG TCGGCTTTTT CTCGGTTATT GTGCAGGGGG GGCTGATCAG GCAGCTCATC AAGAAACTCG GAGAACACAA ACTGTTTCTC TGGGGCCATA TCTTTACCTT TGCCGGCGTC TTTTTTGTCC CGTTCATTCC TCAGGATACG TTGTTCTCGT ACGGACTGCT CATACTGCTC TGCTTTGCGA TCGGCACGAG TCTCGTTGCG CCCATCAACC TCTCCATGAT CTCTCTCTAC AGCTACAAAC AGAAGCAGGG GCAGATTCTC GGTCTTTCGC AGTCGGTCAA CTCGTTTGCA CGCATCATGG GGCCGTTCAG CGGCAGTATT CTTTACGGCA TGAATTTTCA TGCCCCCTAC ATCGTAGCCG GTCTGCTTAC CATCATTGGC ACGTTTATAG CGTTCGCCCT GTTCAAGTAT AAAATCGAAG CCCTCGAACC CGTTGCGGAA GCCGAAAGCA TCTGA
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Protein sequence | MKKSPLVILL LTVMLDLIGF GIVLPLLPTY AKDLGASPFM IGLIAAIFSI MQFIFSPLWG KLSDKIGRRP VMLISIFVTA LSYLIFSQSD TILLLIFARG LSGIGSANIA AAQAYITDVT DSKSRSGAMG MIGAAFGVGF IIGPLVGGLL KHNYGIEMVG YVASALIFFD FILAIFFLPE SNKQAKKFNL GMFSGKSAAS GSANGSSSSF LKEKITEYVD GLKLTFSSKP LALLMIANYI FTFAIVNMQV ASILLWKEYF GASDQEIGYI FAYVGFFSVI VQGGLIRQLI KKLGEHKLFL WGHIFTFAGV FFVPFIPQDT LFSYGLLILL CFAIGTSLVA PINLSMISLY SYKQKQGQIL GLSQSVNSFA RIMGPFSGSI LYGMNFHAPY IVAGLLTIIG TFIAFALFKY KIEALEPVAE AESI
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