Gene Clim_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0946 
SymbolaroK 
ID6355395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp1035117 
End bp1035716 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content52% 
IMG OID642668570 
Productshikimate kinase 
Protein accessionYP_001943001 
Protein GI189346472 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.133424 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACATC ATTCGCTCAT ATTTCTTACA GGGTTCAGCG GATCGGGCAA ATCGACCATC 
GGGCCGCTGC TTGCAAACTC CCTCGGCTAC GGCTTTATCG ATCTCGATCA GGAGATCGAG 
AGCAAGGCGG GTAAATCCAT AACGAAAATT TTTGCCGAAG AGGGCGAACA GACGTTCAGG 
AACCTTGAAC TCGAAACGTT GCGGCAGCTT ACCGGAAAAA AAGAGCTGGT TGTGTCGCTT 
GGCGGGGGCG TTCTTGAAAA TAACGACTGT TATCGCCTCA TCAGGGAGAA CGGAACGCTC 
GTCTATCTGA AATCGTCGCC CAGATCGCTG GCCAGAAGGC TGTGCAACAA AACCGACCGT 
CCGCTGCTCA AAGGTGAGCA CGGAACCCGG CTTTCGCGTG AAGAGATTGA ACTGAAAATC 
AGCACCATTC TCGAAAAACG GGAACCGCGA TATGCAACGG CCGACCTGAG CGTACAAACC 
GACATCAAGC GTATCGGTTC AACCGTTGAA GAACTGACCA GAACAATCAT TCGTTTTGTC 
CGGCAAGCCG AACAGGCCCG GCTGAAACAG CAATCAGACA ACAACAGAGA GAAACAGTGA
 
Protein sequence
MKHHSLIFLT GFSGSGKSTI GPLLANSLGY GFIDLDQEIE SKAGKSITKI FAEEGEQTFR 
NLELETLRQL TGKKELVVSL GGGVLENNDC YRLIRENGTL VYLKSSPRSL ARRLCNKTDR 
PLLKGEHGTR LSREEIELKI STILEKREPR YATADLSVQT DIKRIGSTVE ELTRTIIRFV 
RQAEQARLKQ QSDNNREKQ