Gene Clim_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0886 
Symbol 
ID6354123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp972160 
End bp973296 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content52% 
IMG OID642668513 
Productsodium ion-translocating decarboxylase, beta subunit 
Protein accessionYP_001942944 
Protein GI189346415 
COG category[C] Energy production and conversion 
COG ID[COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit 
TIGRFAM ID[TIGR01109] sodium ion-translocating decarboxylase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGGAC TTCTCAGGTT TCTCAGTTAT TCCGGCTTTG CCAATGTCAC CGCCGGTCAT 
ATCATCATGG TTCTTATCGG GCTTGGTTTT ATCTACCTTG CCATCCGTTA TGAGTATGAA 
CCGTTGCTCC TTGTCCCGAT AGGATTCGGA ATCCTTATAG GCAACACGCC GTTCATGGAA 
CATGCCGGTC TCCAGCTGGG CATCTACGAG GACGGAAGCG TGCTGAACTA TCTCTATCAG 
GGTGTTCTCA AGGGGATCTA TCCCCCGCTG ATCTTTCTGG GAATCGGGGC GATGACCGAC 
TTTTCGACGC TCATATCCAA TCCGAAACTG ATCCTTCTGG GCGCTGCAGC CCAGCTTGGT 
ATTTTTATGA CCTACATCGG CGCACTGCTT CTCGGGTTCA CCAATCCGGA ATCGGCATCA 
ATAGGCATCA TCGGCGGAGC GGACGGACCT ACAGCTATTT TTCTGGCTTC AAGGCTTGCT 
CCCCACCTTA TCGGATCGAT CGCAGTTGCC GCCTACTCCT ATATGGCACT GGTGCCGATC 
ATCCAGCCGC CGATCATGCG GCTGCTTACG ACAGAGAAGG AGCGCAGGAT AAAAATGAAA 
CCCCCCAGAT CGGTCACAAA ACAGGAAAAA ATTCTGTTTC CTGTTTTCGG GCTGCTTCTG 
ACCGGTTTTA TCGCACCGGG TTCCCTTCCG TTGCTCGGCA TGCTTTTTTT CGGCAACCTG 
CTGAAAGAGT CGCTGGTAAC AAAACGGCTT GCCGATACCG CAAAAAATGC GCTTATCGAT 
ATTGTCACCA TTATACTCGG CATAACCGTT GGAGCCTCAA CCCAGGCAAC GACATTTCTT 
ACCCCGCAGT CGATGCTGAT TTTCGTTCTT GGAGCGCTGT CGTTCATGTT CTCGACTGCA 
GGAGGTGTGC TTTTCGCAAA GTTCATGAAC ATTTTCCTTT CCGGAGAGAA CAAAATCAAC 
CCGCTTATCG GTGCGGCAGG AGTTTCGGCT GTCCCTGACA GTGCGCGTGT AGCCCAAAAT 
GAGGGCTTGA AAGCTGACCC GTCCAATCAT CTGCTGATGC ATGCCATGGC TCCGAATGTT 
GCCGGAGTGA TCGGTTCAGC GGTTGCTGCC GGTATCATGA TGAGCTTTCT GATGTAA
 
Protein sequence
MEGLLRFLSY SGFANVTAGH IIMVLIGLGF IYLAIRYEYE PLLLVPIGFG ILIGNTPFME 
HAGLQLGIYE DGSVLNYLYQ GVLKGIYPPL IFLGIGAMTD FSTLISNPKL ILLGAAAQLG 
IFMTYIGALL LGFTNPESAS IGIIGGADGP TAIFLASRLA PHLIGSIAVA AYSYMALVPI 
IQPPIMRLLT TEKERRIKMK PPRSVTKQEK ILFPVFGLLL TGFIAPGSLP LLGMLFFGNL 
LKESLVTKRL ADTAKNALID IVTIILGITV GASTQATTFL TPQSMLIFVL GALSFMFSTA 
GGVLFAKFMN IFLSGENKIN PLIGAAGVSA VPDSARVAQN EGLKADPSNH LLMHAMAPNV 
AGVIGSAVAA GIMMSFLM