| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0868 |
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| Symbol | |
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| ID | 6354103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 948236 |
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| End bp | 950383 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642668493 |
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| Product | methylmalonyl-CoA mutase |
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| Protein accession | YP_001942926 |
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| Protein GI | 189346397 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCGG ACTTTTCTGA AATCGATATT TTTTCTCTCC CTGAAGAAAC CCCCTCTGCT
GCAGAAATAC CGGTAGCGGA AAACTGGACG ACAGCTGAAG GTATCGGAAT CCGCTCACGC
TATACGGCGC GCGACATAGA AAAAGCCGAT CACCTCCACT TCGCTCCGGG GTTTCCTCCT
TACGCCGGGG GACCATACTC GACCATGTAC ACCACGAGGC CCTGGACTAT CCGCCAGTAT
GCCGGCTTTT CAACTGCTGA AGAGTCTAAT GCGTTTTACC GCAAAAATCT TTCCGCAGGT
CAGAAAGGGC TCTCGGTTGC TTTCGACCTT CCGACGCACC GGGGTTACGA CTCGGACCAT
GAACGGGTAA TCGGCGACGT CGGCAAGGCT GGCGTTGCCG TCGATTCGGT CGAGGATATG
AAAATTCTCT TCGATCGCAT TCCTCTCGAC GACATCTCGG TTTCGATGAC CATGAACGGA
GCGGTACTAC CGGTCATGGC ATTTTACATC GTTGCAGCCG AAGAACAGGG AGTTCCGGTC
GAAAAACTGA GCGGCACCAT TCAGAACGAC ATTCTCAAAG AGTTCATGGT GCGAAACACC
TACATCTATC CGCCTGAACC CTCGATGCGC ATTATCGGCG ATATTTTCCG CTATACCAGC
GGCAGGATGC CGAAATTCAA TTCGATCAGC ATTTCCGGGT ACCACATGCA GGAAGCCGGA
GCCACCGCAG ATCTTGAACT TGCCTACACG CTCGCTGACG GGCTCGAATA CATCCGTACC
GGCCTGAAGT CCGGTCTTGA TATCGACAGC TTTGCTCCCC GTCTCTCCTT TTTCTGGGCT
GTCGGCATGA ACTATTTCAT GGAAATCGCC AAACTGCGTG CGGCAAGAAT GCTCTGGGCA
AAAATCGTAA GCGGCTTCAA TCCGAAAAAT CCGAAATCGC TGATGCTGCG CTCACACTGT
CAGACATCCG GATGGAGCCT GACGGAACAG GATCCTTACA ACAACATTGC CCGAACCTGC
ATCGAAGCGC TTGCCGCCAC ACTCGGCCAT ACGCAATCGC TGCACACCAA TGCACTTGAT
GAAGCTATAG CCCTTCCGTC TCCCTTCTCC GCCAGGATCG CCCGAAACAC GCAGCTCTAC
CTGCAGGAAG AGACCGACAT CACCAGATGT ATCGACCCCT GGGCGGGTTC TCACTATGTC
GAATATCTCA CCGGAGAGCT TGCAGAGAAA ACATGGAAAA TCATCAGTGA GATCGAAGAG
GCTGGAGGCA TGGTCAAGGC TATCGAACAG GGACTGCCGA AACTGCGCAT AGAGGAGGCT
GCAACCCGAA AACAGGCCCG CATCGACTGT GGAGAGGATA TTATCGTAGG CGTAAACGGC
TACACCACCA GCAGCAGTAC CGATATCGAT CTTCTTGAAG TGGACAACAC CATGGTGCTC
CAGCAGCAGG TCGATCGCCT TAAACGGATC AGAGCCGAAA GAAACAGCGA GGAAACCGCT
TCAGCCTTGC AGGCAATCGA AAGCTGTGCC GAAAACGGCA CAGGAAACCT GCTCGAACTG
GCCGTCGATG CAGCCCGAAA GCGGGCTACC CTCGGAGAAA TTTCATCCGC CTGCGAAAAG
GTGTTTGGCC GGTACCGTTC CTCCATCAGG CTCAATACCA ACGTTTACCG CTCACAGATG
CAGCATAACA GGCTATTTCA GGAAGCGCAG GAACTTGCCG ACCGCTTCGC CTCGCTTGAA
GGGCGCAGAC CGAGAATCAT GGTGGCCAAG GTTGGTCAGG ACGGCCATGA CCGGGGAGCC
AAGGTAATCT CTGCAGGTTT TGCCGACATA GGATTCGATG TGGATATCAG CCCGCTCTTC
CAGACACCTG AAGAGGTTGT CCGGCAGGCA CTCGATAACG ACGTGCACCT TATCGGCATC
TCAAGCCTCG CCGCAGGCCA TAAAACACTG ATTCCAAAAA TCATCGAGTC ACTCAGGGAT
GCGCACCGCG AGGATATTCT TGTCGTGGCG GGCGGCATCA TTCCTGAACG CGACCATGCG
TTCCTTTACC AGCAGGGCGT GGCAGGCATC TTCGGACCGG GTACCGTTAT AGCCGATGCT
GCGGTGAAGA TACTTAAACT GCTGCTCGCA AAATTCGAAC ATGAGTAG
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| Protein sequence | MRPDFSEIDI FSLPEETPSA AEIPVAENWT TAEGIGIRSR YTARDIEKAD HLHFAPGFPP
YAGGPYSTMY TTRPWTIRQY AGFSTAEESN AFYRKNLSAG QKGLSVAFDL PTHRGYDSDH
ERVIGDVGKA GVAVDSVEDM KILFDRIPLD DISVSMTMNG AVLPVMAFYI VAAEEQGVPV
EKLSGTIQND ILKEFMVRNT YIYPPEPSMR IIGDIFRYTS GRMPKFNSIS ISGYHMQEAG
ATADLELAYT LADGLEYIRT GLKSGLDIDS FAPRLSFFWA VGMNYFMEIA KLRAARMLWA
KIVSGFNPKN PKSLMLRSHC QTSGWSLTEQ DPYNNIARTC IEALAATLGH TQSLHTNALD
EAIALPSPFS ARIARNTQLY LQEETDITRC IDPWAGSHYV EYLTGELAEK TWKIISEIEE
AGGMVKAIEQ GLPKLRIEEA ATRKQARIDC GEDIIVGVNG YTTSSSTDID LLEVDNTMVL
QQQVDRLKRI RAERNSEETA SALQAIESCA ENGTGNLLEL AVDAARKRAT LGEISSACEK
VFGRYRSSIR LNTNVYRSQM QHNRLFQEAQ ELADRFASLE GRRPRIMVAK VGQDGHDRGA
KVISAGFADI GFDVDISPLF QTPEEVVRQA LDNDVHLIGI SSLAAGHKTL IPKIIESLRD
AHREDILVVA GGIIPERDHA FLYQQGVAGI FGPGTVIADA AVKILKLLLA KFEHE
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