Gene Clim_0866 details

Gene Information

• Locus tag: Clim_0866
• ID: 6354101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: +
• Start bp: 946731
• End bp: 947192
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642668491
• Product: UspA domain protein
• Protein accession: YP_001942924
• Protein GI: 189346395
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0589] Universal stress protein UspA and related nucleotide-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.682094
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCAAGA TCCGTACCAT TCTCTGCCCG GTTGACTTTT CCGATGCATC GCGCAAGGCC 
GTACGCTATG CGCATGAATT TGCCGTCAGC ATGGGCGCTT CGATTTTTCT GCTCAATGTT 
GTCGAACCCA GGCCTATGGC GGTCGATCTT TCTCTGAACT ACATCCCTCT TGAAGAGGAT 
CTCGAAAAAG CCGCAGAAGA GGATCTCGAT GTTCTGAAGA ACGAGCTGCT GACTGAAGGT 
CTGAAGGTTG AGAGTTCGGT CGAGATAGGT AATCCGGCGG ATGTTATCCT TGAAAAAACC 
GCTGAACTTG ATGTAAACCT TGTCATTATG GGCTCTCATG GCAAGAAGGG GCTCAGCCGC 
CTGATTATGG GAAGCGTTGC TGAAACCGTG GTCCGCAAGG CCAACTGCCC GGTACTGATC 
GTAAAGAGTG ACGAAAAGGA GTTTATAGAG GAGCAGGGTT AA 

 

Protein sequence

MFKIRTILCP VDFSDASRKA VRYAHEFAVS MGASIFLLNV VEPRPMAVDL SLNYIPLEED 
LEKAAEEDLD VLKNELLTEG LKVESSVEIG NPADVILEKT AELDVNLVIM GSHGKKGLSR 
LIMGSVAETV VRKANCPVLI VKSDEKEFIE EQG