| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0791 |
|---|
| Symbol | |
|---|
| ID | 6353861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | - |
|---|
| Start bp | 864572 |
|---|
| End bp | 866164 |
|---|
| Gene Length | 1593 bp |
|---|
| Protein Length | 530 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642668415 |
|---|
| Product | peptide chain release factor 3 |
|---|
| Protein accession | YP_001942850 |
|---|
| Protein GI | 189346321 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG4108] Peptide chain release factor RF-3 |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA CCAGGGAAAT AGCAAAACGC AAAACCTTTG CCATCATCAG CCACCCTGAT
GCCGGTAAAA CCACCCTTAC CGAAAAGTTT CTGCTTTTCG GCGGCGCAAT CCAGACTGCC
GGTGCGGTTA AAAGCAACAA GATCCGCAAA ACCGCCACCA GCGACTTCAT GGAAATCGAG
AAACAACGAG GTATCTCGGT TGCCACTTCG GTTATGGGAT TCGAATACAA GGGCCGCAGG
GTCAACATTC TCGACACCCC CGGCCACAAG GATTTCGCGG AGGACACCTA TCGCACCCTG
ACTGCCGTTG ACAGCGTCAT TCTCGTTGTC GATTGCGTCA AGGGCGTCGA GGCTCAGACC
GAGCGCCTCA TGGAGGTCTG CTCGATGCGC CATACACCGG TCATCATATT CATCAACAAG
ATGGACCGAG AGGGCCGGAA CCCTTTCGAG CTGCTCGACG AAATAGAGGA AAAACTGCAG
ATTCAGGTAC GTCCGCTCAC CTGGCCGATC AGCCAGGGAC AGACCTTCAA AGGGGTCTAT
AATATGTACA ATAAGGAGCT GAACCTTTTT GAGGCCAATG CCACCAAAAT CAGCGCGTCG
CTCATCAAGA TCAAGAGCCC TGACGATCCG GAACTGCTGA AATGGATACC GGAAAGCTTC
TGTGAAAAAC TGAACGAAGA TATCGACCTC ATTGAAGGGG TCTATGAACC CTTCAGCGAA
GATCTCTATC GCGACGGACT GCTCGCCCCG GTCTTTTTCG GCAGCGCCAT CAACAACTTC
GGCGTACAGG AACTGCTCGA CACCTTCATT CAGATAGCTC CGAGCCCGCA TGAACGCGAA
GCCGCCCAGC GCACGGTCAT AGCGTCGGAA GAAGCACTGA CCGGCTTCGT CTTCAAAATT
CATGCAAATC TCGACCCCAA TCACCGCGAC CGGACCGCAT TCTTCAGAAT CTGTTCGGGA
AAATTCGAGC GCAACAAATT CTACCTCCAC ACCCGACTCG GCAAGAAAAT CCGCTTCTCC
AGTCCGACGC AGTTCATGGC GAACGAGAAA AGCGTGATCG ACGAAGCGTG GCCAGGAGAC
GTAATCGGAC TCTACGACAA CGGCTCCCTG AAAATCGGCG ATACGCTCAC AGAAGGCGAA
GAACTGCAGT TCCGCGGCAT TCCGAGTTTT TCTCCGGAAA TCTTCAAGGT ACTGGAAAAC
CGCGATCCGC TTAAGACAAA ACAGCTCGAC AAGGGAATCC GGCAGCTCAC CGAAGAGGGC
GTCGCGCAGC TCTTCGTCCA GTACGGCAGC CGCAAGATCG TCGGTACCGT CGGCGAACTG
CAGTTCGACG TCATCAAGTT CCGCCTCGAA CACGAATACG GCGCCCAATG CGACTTTCTG
CCGCTCCGTT ACCACAAGGC GTTCTGGATC ACCAGCGATA ACAAAATACA GCTCGAAGAG
TTCATCCGGC GCAAATCGAC AGCCATAGCG CTCGACCGCG AAGACCACCC GGTGTTCCTG
GCCGAAAGTG AATGGATGCT GAAGGTCGCC CGCGAGGACT ATCCGGAGCT TGAATTCCAC
GCCACCTCGG AATTCAAGAC CGCCGGGGAG TGA
|
|---|
| Protein sequence | MDLTREIAKR KTFAIISHPD AGKTTLTEKF LLFGGAIQTA GAVKSNKIRK TATSDFMEIE
KQRGISVATS VMGFEYKGRR VNILDTPGHK DFAEDTYRTL TAVDSVILVV DCVKGVEAQT
ERLMEVCSMR HTPVIIFINK MDREGRNPFE LLDEIEEKLQ IQVRPLTWPI SQGQTFKGVY
NMYNKELNLF EANATKISAS LIKIKSPDDP ELLKWIPESF CEKLNEDIDL IEGVYEPFSE
DLYRDGLLAP VFFGSAINNF GVQELLDTFI QIAPSPHERE AAQRTVIASE EALTGFVFKI
HANLDPNHRD RTAFFRICSG KFERNKFYLH TRLGKKIRFS SPTQFMANEK SVIDEAWPGD
VIGLYDNGSL KIGDTLTEGE ELQFRGIPSF SPEIFKVLEN RDPLKTKQLD KGIRQLTEEG
VAQLFVQYGS RKIVGTVGEL QFDVIKFRLE HEYGAQCDFL PLRYHKAFWI TSDNKIQLEE
FIRRKSTAIA LDREDHPVFL AESEWMLKVA REDYPELEFH ATSEFKTAGE
|
|---|
| |