Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0645 |
Symbol | |
ID | 6354093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 721160 |
End bp | 721924 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 642668276 |
Product | Type II site-specific deoxyribonuclease |
Protein accession | YP_001942711 |
Protein GI | 189346182 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000000618072 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAA TGGATCGAAA CCGAATTGAA TTGCTGGTTG CATCCATTCG GGAACTTACT CCGGGACAAT TTTCATGGCT GGAGAGAACA GTTCAGATAT TTCAGTGTGA GCATCACTAC TCGATTTTGC ACTCTGACCT TCTTGACGAA GAAACTCTGG AAAATTTTGG TGATGCACTG AGAATCCATC ACAGTTTTTC AGTGGAGCCA TTTTCAAAGG ATAAATTTGA ATACGTTCTT GAACGGGTTG TCAACATGTC ATCCGAGCGC GCAAAGCTTG CCTCAAAAGG GAACCGGGGT CATGATATCA CCATAGACAA TACGCGGGTT TCACTAAAAA CACAGGCAGA CAAGGGGATC AGGGAGGGCA AAATATGGAT CAGTAAATTT ATGGAACTGG GAAAGGGTCA CTGGGGCGAT AATCCGGATG ATCTGGTATT GCTGCGCAAC ATTTTTTTAG CGCATCTTGA CAATTACGAG AGAATACTCA TTCTTCGGGC TCTTCGGAAA GCGCCGGACT GGATATACGA ACTGGTGGAA ATACCCAAGC AGCTTCTGTT GCTTGCGGGC AATGGAAAAC TCGAGATGAA AACTGAAAGC AGGCAATTTC CAAAACCAGG CTATTGCTTT GTATGTGAAG GTGATACAGA GTTATACCAG CTTTACTTTG ATGGAGGGAG CGAGCGAAAG CTTCAGCTCA AAAATCTTCT TAAAAGTCGC TGTATTGTGC ATGCACGATG GGAATTTACG ATTCCTGCAG TATAA
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Protein sequence | MREMDRNRIE LLVASIRELT PGQFSWLERT VQIFQCEHHY SILHSDLLDE ETLENFGDAL RIHHSFSVEP FSKDKFEYVL ERVVNMSSER AKLASKGNRG HDITIDNTRV SLKTQADKGI REGKIWISKF MELGKGHWGD NPDDLVLLRN IFLAHLDNYE RILILRALRK APDWIYELVE IPKQLLLLAG NGKLEMKTES RQFPKPGYCF VCEGDTELYQ LYFDGGSERK LQLKNLLKSR CIVHARWEFT IPAV
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