Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0622 |
Symbol | |
ID | 6354070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 701120 |
End bp | 702010 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642668253 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001942688 |
Protein GI | 189346159 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.260695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAC GACTCATTTC AGGCTCCGCC GTCGCTCTCG TTACTCCGTT CAGGCAGGAC TGCTCTGTCG ATACCGTTGC ATTACGACAA CTGGTACGGT TTCACATTGC AGCCGGAACC GATATTATCA TCCCCTGCGG AACAACCGGG GAATCGCCGA CACTCTCTAT GGAGGAGCAG TCACGCATCA TCCGTACGGT AAAAGAGGAA GCCGGCGAAC AGATCATGGT TGCGGCAGGA GCCGGAACCA ACGCCACGGA CCATGCGGTC GAGTTGGCGA AAAATGCAGA AAAAGCCGGG GCTTCGGCCA TACTCTCTGT CGCACCCTAC TATAACAAGC CTTCCCAGGA AGGCATCTAT CAGCACTACG CCCGCATTGC CGAAGCAGTC TCCGTTCCGA TTATCATCTA CAACGTTCCC GGCAGGACGG GCAGCAATGT GGCGGCATCG ACGATTCTCA GGCTTGCCCG TGATTTCGGC AACATCGCGG CAGTCAAGGA GGCTTCGGAT AACATGGCCC AGATAACGGA ACTTCTCGAA GAAAGACCTG AGAACTTTTC CGTACTGACC GGCGAGGATA TGCTTATTCT TCCGTTCATG GCGATGGGAG GAGACGGAGT TATTTCCGTA GCGGCGAACC AGGTGCCGTC GGCAGTCAAG CGTTTGGTCG AAGCTGCCCG CACCGGACGT CTTGACGAAG CCCGCGCGAT CAACACCCGA TACCGTCGGC TCTTCAGGCT TAACTTTATT GAAAGCAATC CGGTACCGGT TAAGTACGCG CTGGCCCTGA TGGGTATGAT CGAAGAGGTC TATCGGCTTC CGCTTGTTCC ACTGGCGGAT GAAAACAAGC GCATCCTGAA AGAGGAGCTT CAGAGCCTCG GGCTTGTGTA A
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Protein sequence | MSTRLISGSA VALVTPFRQD CSVDTVALRQ LVRFHIAAGT DIIIPCGTTG ESPTLSMEEQ SRIIRTVKEE AGEQIMVAAG AGTNATDHAV ELAKNAEKAG ASAILSVAPY YNKPSQEGIY QHYARIAEAV SVPIIIYNVP GRTGSNVAAS TILRLARDFG NIAAVKEASD NMAQITELLE ERPENFSVLT GEDMLILPFM AMGGDGVISV AANQVPSAVK RLVEAARTGR LDEARAINTR YRRLFRLNFI ESNPVPVKYA LALMGMIEEV YRLPLVPLAD ENKRILKEEL QSLGLV
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