| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0603 |
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| Symbol | |
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| ID | 6354051 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 675302 |
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| End bp | 677095 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642668234 |
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| Product | signal peptide peptidase SppA, 36K type |
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| Protein accession | YP_001942669 |
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| Protein GI | 189346140 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type
[TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.849681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGGAA AAAGTTGTCT GCGTACGGGA TGTTTTGTGT TTGTGCTCGT TCCGGTGATT
ATTGCGGTTC TGTTTTTCGC GTTTTTCCGA TCTTCGCACG ATCTTCCCGA TCGTTTCGTT
CTGACGGTGC CTCTTGGCGG ATCGCTGGAA GAGAGGAGTG CGGAATCTTC GCCGGTACCG
TATCTCATGC AGGGCGAATC CCTGTCGTTT CAGGATCTGC TTTTTCTGTT CAACCAGGCC
GCGGGCGATA AGCGCATCGA CACGGTACTG CTTGAAATCG GCGGATTGCG TACCTCTCCG
GCAAAAATAA CCGAACTGCG AGAGGCTATC GAGAAAGTCC GGGCCGGCGG ACGGAAAGTC
GTCGCGTATT TGCATTCGGC AGAGGACAGC GACTATCTGC TGGCTTCCGC CTGCGACTCG
ATCGTCGTCG AACGAGGCGG TTATCTTCTG CTTGACGGGC TCAAGGCCGA ATCGCTCTAC
TATACGACTC CGCTCGGCAG GATCGGCGTT ACTTTTCAGG CCGCACAGTG GAAGAAGTAT
AAAAGCGGGG TTGAGCCTTA TACCAGAACG GCCGCAAGTC CTGAATATAT CGAGCAGATC
AACGCCCTGC TTGACGACGT CTATGCCGAT TATATCGGGT ACGTCTCAAA AAGGCGCGGC
ATCAGTCGCG ACTCGCTTGA ATCGGTCATT AACAACGTTG CGCTCGTTTC TGCGGCAAAA
GCGGTGAAAC TCGGTCTTGC CGATGGTGTC GCTACGATAT GGGAGCTGAA ACGGGCGACA
GGCCGCAGGA TCAGCGGCAA GGAGCCGGAG GAGAACGACA GGCTGTTCGT TCAGGCAGAC
AGATATCGCG AAACGCTCGA CTGGCCGGTA AAGGCTTCGG GCAGCGAGGC TGTTGCCGTT
ATCACCCTTT CAGGCCCGAT TGTCCGCAGT GTCGGCAGTT CCGCCATGAG CGTTGATGAG
GGAACCGATG TCGGCATGCT TCGCCGTTCT CTTGACGCGG CTCTCTCCGA TAAAGAGGTC
AAGGCGCTTG TTCTGCGTAT CGACAGTCCC GGAGGGGATG CGCTGGCTTC TTCCGATATG
CTGCAGATGC TTGATTCGGC GGCGGTAAAG AAACCGCTTG TTGTGTCGAT GTCGGGCATT
GCCGCATCGG GCGGCTACAT GGCGGCGCTG GCCGGCAGGG AAGTGTATGC GATGCCGCTT
ACCGTTACCG GTTCGATAGG CGTTTACGCG CTCAAGCCTG ATATCAGCGA GCTTGCACGG
AAAGTCGGCC TCGGACGCGA TGTGGTTACG CGGGGGCGTT TTGCCGATGC CAATACGGTG
TTCAAGCCCC TTGAAGGCGA AGCATATGAA AAATTTATCG GTGCTTCCGG CGATATCTAC
CTCGATTTCA TCGGCAAGGT CGCGGCATCC CGGAAGATGT CGGTTGCCGA AGTCGATTCG
GTAGCCGGAG GACGGGTCTG GACCGGCAGG CAGGCGAAAC AGAAAGGTCT TGTCGATCAT
GCGGGAGGGC TTTTTGCCGC GGTCAGGGCA GCCCAGCGAC TTGCAGGGAT GGACGGGTCG
AAACAGCCGC AGATTCTGCT CTATCCGGAA CAGAAAAGCT GGTTTCAGAT GCTTCTGGAA
GGCAACCCGC AAGATATTGT CGGCAGTCTG GAGCGGATGG CCATGAGAAG AGTGCTGCAT
GAGGTGGCGC CGCAGTCGCC CTACAGCGCC ATGCTTCGCA TGCACGAGAT GCTGATGCGG
AGCGGAGAGG TGGAGTTGCT TGCTGCCATG CCCTTCGAAA TCATCATCCG CTGA
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| Protein sequence | MKGKSCLRTG CFVFVLVPVI IAVLFFAFFR SSHDLPDRFV LTVPLGGSLE ERSAESSPVP
YLMQGESLSF QDLLFLFNQA AGDKRIDTVL LEIGGLRTSP AKITELREAI EKVRAGGRKV
VAYLHSAEDS DYLLASACDS IVVERGGYLL LDGLKAESLY YTTPLGRIGV TFQAAQWKKY
KSGVEPYTRT AASPEYIEQI NALLDDVYAD YIGYVSKRRG ISRDSLESVI NNVALVSAAK
AVKLGLADGV ATIWELKRAT GRRISGKEPE ENDRLFVQAD RYRETLDWPV KASGSEAVAV
ITLSGPIVRS VGSSAMSVDE GTDVGMLRRS LDAALSDKEV KALVLRIDSP GGDALASSDM
LQMLDSAAVK KPLVVSMSGI AASGGYMAAL AGREVYAMPL TVTGSIGVYA LKPDISELAR
KVGLGRDVVT RGRFADANTV FKPLEGEAYE KFIGASGDIY LDFIGKVAAS RKMSVAEVDS
VAGGRVWTGR QAKQKGLVDH AGGLFAAVRA AQRLAGMDGS KQPQILLYPE QKSWFQMLLE
GNPQDIVGSL ERMAMRRVLH EVAPQSPYSA MLRMHEMLMR SGEVELLAAM PFEIIIR
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