Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0602 |
Symbol | |
ID | 6354050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 674253 |
End bp | 675236 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642668233 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001942668 |
Protein GI | 189346139 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.154872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCCAC AGCATCAGCT CCTCTCGGCA AAGGATATTT TCGTTCATTT TCCGCTTAAA TCAGGGGGTG TGTCGGGTAA GGCGCGGCGG GTGAGTGCCG TTAACGGGGT TTCGTTCGAG GTGAACAAAG GCGAAACCCT CGGTCTTGTC GGCGAGTCGG GGTGCGGGAA AACCACTCTC GGCAGGGCGC TTATGCGTAT CGGGCACGGG ATTGTCGACG GAACGGTCGT GTTTGACGGC AGGGAGATAT CCTCGTTGAG CAACCGCGCC TTCGGCCCTT TGCGCAAAGA GATGCAGATG ATTTTTCAGG ACCCCTACGG GTCGCTCAAT CCCAGGCTGA CCATCGGCCA GACGATTGCC GAGGTGCTTG CCGTTCACCG GCTGGCAAAA GGTGAGGCTG CCCGCAAAAA AACCCTTGAA CTGCTTGACA TTGTTGGATT GAACAGCGAG TATGCCGACC GGTATCCGCA TGAGTTTTCA GGAGGGCAGC GGCAGCGGGT GGGCATTGCA AGAGCACTTG CGGTAAATCC GTCCTTTATC ATCTGCGATG AACCGGTATC CGCTCTCGAT GTTTCGATTC AGTCGCAGAT CATCAACCTC CTGAAAGATC TCCAGCGGGA TTTCGGACTT ACCTATCTGT TTATCGCTCA CGATCTTTCG GTTGTCGAAT ACATTTCGGA CCGCGTCGCG GTGATGTATC TGGGTAAAAT CGTCGAGATC ACCTCATCGC AGGAACTCTA TACCAATCCC AAACACCCCT ATACGCGCGC GCTGCTCTCG TCCATACCTG TTCCGGAGCC TGACGGAAAA AAAGAACGGA TTCTTCTCAA AGGGGATCTT CCGGGCCCGA TGCATATCCC TTCCGGCTGC AGCTTTCATC CGCGTTGTCC GGTTGCGAAG CCGGAGTGCA GCAAGAGGGA GCCCCGGCTG CTGCCGCTCG ACGGGAACGA TGCCCATCGG GTGAGTTGTC TGCTCTATGA GTGA
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Protein sequence | MNPQHQLLSA KDIFVHFPLK SGGVSGKARR VSAVNGVSFE VNKGETLGLV GESGCGKTTL GRALMRIGHG IVDGTVVFDG REISSLSNRA FGPLRKEMQM IFQDPYGSLN PRLTIGQTIA EVLAVHRLAK GEAARKKTLE LLDIVGLNSE YADRYPHEFS GGQRQRVGIA RALAVNPSFI ICDEPVSALD VSIQSQIINL LKDLQRDFGL TYLFIAHDLS VVEYISDRVA VMYLGKIVEI TSSQELYTNP KHPYTRALLS SIPVPEPDGK KERILLKGDL PGPMHIPSGC SFHPRCPVAK PECSKREPRL LPLDGNDAHR VSCLLYE
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