| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0553 |
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| Symbol | |
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| ID | 6354904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | + |
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| Start bp | 624283 |
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| End bp | 626508 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642668189 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_001942624 |
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| Protein GI | 189346095 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACAA CGTCTAAAAT TATCTATACA AAGATCGATG AAGCGCCCGC TTTGGCGACC
TATTCCCTTC TGCCGGTTAT TCAGGCATTC ACCAGGGGTA CCGGTGTCGA AGTGGAGACA
AGGGATATTT CCCTCGCCGG CAGGATTATT GCCAACTTTC CGGATAATCT TACTGACGAC
CAGAAAATTT CCGATCAGCT TGCCGAACTT GGCGAGCTTG CCCTGAAGCC TGAAGCCAAC
ATTATCAAGC TGCCCAATAT CAGCGCCTCG ATTCCTCAGC TCAAAGCAGC GATCGCGGAA
CTGCAGGATC ATGGGTACAA GGTGCCCGAT TACCCTGAAG CTCCTGCAAC CGATGCAGAA
AAAGAGATTC AGACCCGTTA TGCGAAAGTA CTTGGCAGTG CCGTGAACCC TGTGCTGCGT
GAAGGCAATT CCGATCGTCG GGCGCCGCTT TCGGTGAAAC AGTTCACAAA GAAGCACCCC
CACAGGATGG GCGCATGGAG CAGCGATTCC ATGTCGCACG TTGCTCACAT GAAAGATGGC
GATTTCTACG GCAGCGAGAA ATCCCTTACC GTCGGAGCCC CGACCAGCGT ACGTATCGAG
TTCGTTGACG GCAGCGGCAA CGTCAAGGTG CTCAAGGAAA AAACCGCGCT GCTTGAAGGC
GAAGTGATCG ATACCGCCGT GATGAACGTT CGCTCACTGC GACAGTTTTT CGCCGATCAG
ATCGCCGATG CCAGAGAGTC CGGCATTCTC CTCTCGCTGC ATCTGAAAGC TACCATGATG
AAAGTTTCCG ACCCGGTCAT GTTCGGTCAC GCGGTTACGG TATTTTTCAA GGATGTGTTC
GAAAAACATG CGGCCGTGAT CAAGGAACTC GGCGTGAACG TCAATAACGG ACTTGGTGAT
CTGTACGCTA AAATCCGGAA TCTTCCGGAA GAACAGCGTG CAGGGATCGA GTCTGACATA
CAGGCTGTTT ATCCTGCCCG TCCGGCGCTT GCCATGGTCG ATTCCGACAA GGGCATCACC
AATCTGCATG TGCCGAACGA TATTATCGTG GACGCCTCGA TGCCGGTTGT CATTCGTGAT
TCAGGTAAAA TGTGGGGTCC GGACGGCAAG CTGCACGACA CCAAAGCCAT GATTCCCGAT
CGCTGTTATG CAACCATGTA CCAGGCGATG GTAGAAGATT GTCAGAAAAA CGGAGCATTC
GATCCTGCAG TCATCGGCAC CGTGCCTAAT GTCGGACTGA TGGCCCAGAA AGCCGAAGAG
TACGGTTCGC ACGACAAAAC CTTCATGGCC CCGGGCAATG GCTCTATCCG CGTCGTCGAC
GCATCCGGTT CCGTTCTGAT GGAGCAGAAG GTTGAAGAGA ACGATATTTT CAGAATGTGC
CAGGTCAAGG ATGCACCGAT TCGCGACTGG GTGAAACTTG CCGTCAACCG TGCGAGAGCG
ACCGGATCTC CGGCCGTATT CTGGCTCGAC AGCAACCGTG CACATGACCG CGAGATCATC
GCCAAGGTTA ACGAGTACCT CAAGGAGCAC GATACAACCG GCCTTGAGAT CTGTATTCTT
CATCCGGTCG AAGCCATGAA GTTCACTCTC GAGCGGTTCA GGGCCGGCAA CGATACCATT
TCGGTGACAG GCAACGTGCT TCGCGACTAT CTGACCGATC TGTTTCCGAT CATCGAACTT
GGCACCAGTG CGAAAATGCT CTCCATCGTT CCGCTTATGA ACGGAGGCGG GCTTTTTGAA
ACCGGCGCAG GCGGTTCCGC TCCGAAACAC GTGCAGCAGT TCCAGAAAGA GGGCTACCTT
CGCTGGGATT CTCTGGGCGA GTTCTCGGCA CTTGCCGCAT CGCTGGAGCA CCTTGCAAAG
GCATTCAATA ACAGCAAAGC CCAGGTGCTT GCCGATACGC TCGACCAGGC TATCGGGAAA
TTCCTCGATA ACAGCAAATC GCCGGCTCGC AAGGTCGGCC AGATCGACAA TCGCGGAAGC
CACTTCTATC TTGCTCTTTA TTGGGCTCAG GCGCTTGCGG CACAGAGCAC TGATCAGGAA
CTTCAGGCCC GTTTTGTCGA AGTTGCCGGA CAGCTTGCCG AAAACGAGGA GAAGATCAAC
GCAGAGCTCA TCGGAGCGCA GGGAAGTCCG GTTGATATGG GCGGCTACTA CCATCCGAAC
GACGAACTGA CCAGAAAGGC CATGCGTCCG AGCGCTACGT TCAATGCGAT CATCGACGCA
CTGTAA
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| Protein sequence | MATTSKIIYT KIDEAPALAT YSLLPVIQAF TRGTGVEVET RDISLAGRII ANFPDNLTDD
QKISDQLAEL GELALKPEAN IIKLPNISAS IPQLKAAIAE LQDHGYKVPD YPEAPATDAE
KEIQTRYAKV LGSAVNPVLR EGNSDRRAPL SVKQFTKKHP HRMGAWSSDS MSHVAHMKDG
DFYGSEKSLT VGAPTSVRIE FVDGSGNVKV LKEKTALLEG EVIDTAVMNV RSLRQFFADQ
IADARESGIL LSLHLKATMM KVSDPVMFGH AVTVFFKDVF EKHAAVIKEL GVNVNNGLGD
LYAKIRNLPE EQRAGIESDI QAVYPARPAL AMVDSDKGIT NLHVPNDIIV DASMPVVIRD
SGKMWGPDGK LHDTKAMIPD RCYATMYQAM VEDCQKNGAF DPAVIGTVPN VGLMAQKAEE
YGSHDKTFMA PGNGSIRVVD ASGSVLMEQK VEENDIFRMC QVKDAPIRDW VKLAVNRARA
TGSPAVFWLD SNRAHDREII AKVNEYLKEH DTTGLEICIL HPVEAMKFTL ERFRAGNDTI
SVTGNVLRDY LTDLFPIIEL GTSAKMLSIV PLMNGGGLFE TGAGGSAPKH VQQFQKEGYL
RWDSLGEFSA LAASLEHLAK AFNNSKAQVL ADTLDQAIGK FLDNSKSPAR KVGQIDNRGS
HFYLALYWAQ ALAAQSTDQE LQARFVEVAG QLAENEEKIN AELIGAQGSP VDMGGYYHPN
DELTRKAMRP SATFNAIIDA L
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