| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0509 |
|---|
| Symbol | |
|---|
| ID | 6354856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 573451 |
|---|
| End bp | 574425 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642668141 |
|---|
| Product | Na+/Ca+ antiporter, CaCA family |
|---|
| Protein accession | YP_001942580 |
|---|
| Protein GI | 189346051 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTT TTCTGCTCTC TGTTGTCGTT GGCCTCGTTC TGCTTGTCTG GAGCGCCGGA
CGTTTCGTTG ACGGTTCCGC CGCCGCCGCA CGCCATTTCC GCATGCCCCC ACTGCTGATC
GGCATGGTGA TCGTAGGGTT CGGTACATCC GCTCCTGAAA TGTCGGTATC AGCAATCTCC
GCTTCCCAGG GGAATCCCGA TATTGCGCTC GGAAACGTTT TCGGTTCGAA TATCACGAAC
ATCGCGCTCA TTCTCGGTCT GACCGCGCTG CTCAGCCCGA TAGCCGTTCA CTCCCGCGTG
CTTCGCAAGG AACTGCCTGT CCTGACGATC ATGACGGCGA TTGCTGCATT TCTGATGTAT
GACGGCATGT TCAGTCGGCA GGACGCCACT TTTCTGCTGC TTCTTTTCGC TCTCCTGATG
GGTTGGACGG TCTGGGAGGG TATCATGAAA TCGGGCGATG AGTTCGCCGT TGAAATGGAG
AACGAACTGG AGCAGCATCC GATGCCGCTC GGCAAGGCCC TTCTGCTTGT TGCCGCAGGG
CTGCTTCTGC TGCTGGTCAG TTCGCGCATG CTGGTCTGGG GAGCTGTCGG TATTGCCGGA
GCACTCGGTG TGAGCGATAT CGTGATCGGC CTGACCGTGG TAGCCGTCGG CACCTCACTG
CCGGAACTCG CTTCATCGCT TGCTGCCGTG CGCAAGGGCG AGCACGATAT CGCACTCGGC
AACGTGATTG GTTCTAACCT CTTCAACATC CTTGCTGTTG CAGGCGTTGC GGGAGCGATT
TATCCTGCCG TCATCGATCC TGCGGTTTTT TTGCGGGATA TCATGATCAT GCTGCTGCTG
ACCGTTTCGC TTTTTGTTGT CGGTTACGGA TTCCGCGGGG AGGGAACAGG ACGAATAAAC
AGGATCGAAG GCATGATCCT GCTCGGTTCT TACGCAGCCT ATACGATCTA TCTCGTTTCG
ACAAATTTCG GCTGA
|
|---|
| Protein sequence | MLLFLLSVVV GLVLLVWSAG RFVDGSAAAA RHFRMPPLLI GMVIVGFGTS APEMSVSAIS
ASQGNPDIAL GNVFGSNITN IALILGLTAL LSPIAVHSRV LRKELPVLTI MTAIAAFLMY
DGMFSRQDAT FLLLLFALLM GWTVWEGIMK SGDEFAVEME NELEQHPMPL GKALLLVAAG
LLLLLVSSRM LVWGAVGIAG ALGVSDIVIG LTVVAVGTSL PELASSLAAV RKGEHDIALG
NVIGSNLFNI LAVAGVAGAI YPAVIDPAVF LRDIMIMLLL TVSLFVVGYG FRGEGTGRIN
RIEGMILLGS YAAYTIYLVS TNFG
|
|---|
| |