Gene Clim_0472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0472 
Symbol 
ID6354467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand- 
Start bp534543 
End bp535214 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content49% 
IMG OID642668103 
ProductPeptidase M23 
Protein accessionYP_001942544 
Protein GI189346015 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAT TCGGAATTCT GGCTTTCCTC CTGACGCTTT GTCCCATGAA CCCGTTACAT 
GCAGAAGCAA AACAGACGGC TTCAGCGAGC TCTGCTGAAG GACTTCTTGC AAGTACCGAA 
CAAATGATCG AACATCTCAT CCTTCAGATA GACCGCCAGA AAGACAGCCA TCCCGAAATC 
AACCAGCCAG CTGAGAGCAA CCGTCCTTTT TTATCTTCAA TTCCCAATAT CAAACCGATC 
GACGGCAAAA TCACCAGTGG TTACGGCATG CGCCTGCATC CGATCTACAA GGTCATAAAA 
TTTCATTCGG GAACGGATTT TTCCGCTCCT GAAGGCACCA GAGTGCGCTC CACCGGCGAC 
GGAATCGTTA CCTATTCCGG TTATGACAGG GGGTACGGAC AGCAGGTAAC CATAAGTCAT 
GGTTATGGCT TCAAAACCCT TTACGCGCAT CTTTCAAAAT CACTTGTCCG GCAGGGACAG 
CGGATAAGCC GCGGAGAGAT CATTGCGCTT TCAGGAAATA CAGGCATGTC AACAGGACCG 
CACCTCCACT ACGAAGTGCA GAAGGACAAC ATCAAAGTCA ACCCTGCCGC ATACTTCTTC 
GATGACAGCA ACCCTGACAA ATTCATCACG ATACAGAAAC CATCTTCCGA AGAGAACGGC 
AGCAACTCTT AA
 
Protein sequence
MKVFGILAFL LTLCPMNPLH AEAKQTASAS SAEGLLASTE QMIEHLILQI DRQKDSHPEI 
NQPAESNRPF LSSIPNIKPI DGKITSGYGM RLHPIYKVIK FHSGTDFSAP EGTRVRSTGD 
GIVTYSGYDR GYGQQVTISH GYGFKTLYAH LSKSLVRQGQ RISRGEIIAL SGNTGMSTGP 
HLHYEVQKDN IKVNPAAYFF DDSNPDKFIT IQKPSSEENG SNS