Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0318 |
Symbol | |
ID | 6353835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 351657 |
End bp | 353468 |
Gene Length | 1812 bp |
Protein Length | 603 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642667947 |
Product | ABC transporter related |
Protein accession | YP_001942391 |
Protein GI | 189345862 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAATC CTTCCGGTAC TGCGTCAAGC TTCAGGCCGC AACAGGATGA AACCCTGAAA AAGCGCAGAA AGGGATCCAT CGACCGCTAT ATCGTCTCCC GGCTTCTTGA CTATATCAAA CCATACAAGG GTCTTGTTAC GGCAGCAGTC GTCATTACCC TCGCCGGTTC CGTTTTCGGG CCGCTCAGAC CGTTTCTCAC CAAAGTGGCC ATCGATGATC ATATCGCGAA AAACGATCTG CAGGGACTTG CCTTCATCAG CCTTCTGCTT ACGGGAGTAA TTCTTCTTGA AGGCCTGAAA CAGTATGCGT CAACCTGGAT AACCCAGATC ATCGGGCAGA AAGCGGTTTT CAATATTCGA ATGGATGTTT TCCGGCATCT TCAGAAACTG CCTGTCCGTT TTTTCGACAG GAATCCTATA GGACGACTTA TTACAAGAAC CACCAACGAT GTGGAGTCCC TGAATGAAAT GCTTTCGAGC GGCGTCATTT CGATTCTCGG CGACATAGCT CAACTGCTTT TTATTGTCGT CATGATGACC TTGCTCGACT GGCAGCTCAC GCTGATCGTG CTCGGCATAC TCCCGATCAT GCTCTATGTC ACCATGACCT TTAAAAACAA GGTTCGTTCG GCATTCACGG ATGTGCGCAC ACATCTGGCC CGGCTCAACT CTTTTTTTCA GGAACATATC GCCGGCATGA ATATCGTGCA GCTCTTCAAC CACCAGGAGA TCGCTTTCGA CCGCTATGCG GCCGTCAACG CAGATCACCG CGATGCCAAT ATCAGAACGG TATTCTATTT TTCTCTCTAC TACCCGCTTA TCGAACTGCT CAGTTCGATA GCCGCCGGTC TGGTGATCTG GTACAGCGGC GCAAGAGTAC TTAAAGCCGA CCTGACCATT GGAGTGGTCA TCTCGTTCGT CCAGTATATC TGGCTGTTTT TCCGGCCGCT GCAGCATCTT TCCGATAAAT TCAACATCAT GCAGACGGCC ATCACCAGCT CGGACCGCAT CTTCAGGCTG CTCGAAGAAC CCGTCGAACG GGAAGAATCG GAAGGCGATC GCCCGGCGCT GACGTTCAGG GAGTGCATTG CCCTGCACCA TGTCTGGTTT GCCTACGATG AAAAAAACTG GGTGCTTAAA GACCTTTCCT TAGATATTCG AATGGGCGAG AAAATAGCTA TCGTAGGCGC TACCGGAAGC GGAAAAACCA CCATCATCAA TATTCTCTCC GGCCTCTACC CCTATGCACA GGGCTCGGTA ACCATCGATG GAACAGAACT GAAAAACATA CCCGGAAGTT CACTGCGCAA ACTGATCGGT GTGGTGATGC AGGATGTGAT CCTTTTTTCA GGGACACTCC GTGAAAACCT CGCATTCAGC AATCCCGGGA TTCCGGATGA AAAAATTATC GAAGCCGCGC GCATCGTAGG GGCAGACCGT TTCATCAGTC AGCTTCCCGG AGGATACGGC TATCGGGTGA AGGAAAACGG TACCGGGCTG TCCGCAGGTC AGAAACAGCT GATCGCCTTT GTGCGGGCTC TGCTCTACAA CCCTCAGATC CTCGTGCTCG ACGAAGCGAC CAGTTCGGTC GATACCGAAA CCGAGCAGCT CATAGAAGCG GCCACAGCAA AACTCATGCA GGGCAGAACC TCGATCATGA TCGCCCACAG GCTTTCAACG GTTCAGAAAG CCGACAGAAT AATGGTGATG CATAAAGGCG TTATCAGGGA AACCGGCACC CACCAGGAAC TGCTTGCCGA AAGGGGACTC TACTACAAAC TCTATCTTCT GCAGCATCCC GACGGGAGAT AA
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Protein sequence | MSNPSGTASS FRPQQDETLK KRRKGSIDRY IVSRLLDYIK PYKGLVTAAV VITLAGSVFG PLRPFLTKVA IDDHIAKNDL QGLAFISLLL TGVILLEGLK QYASTWITQI IGQKAVFNIR MDVFRHLQKL PVRFFDRNPI GRLITRTTND VESLNEMLSS GVISILGDIA QLLFIVVMMT LLDWQLTLIV LGILPIMLYV TMTFKNKVRS AFTDVRTHLA RLNSFFQEHI AGMNIVQLFN HQEIAFDRYA AVNADHRDAN IRTVFYFSLY YPLIELLSSI AAGLVIWYSG ARVLKADLTI GVVISFVQYI WLFFRPLQHL SDKFNIMQTA ITSSDRIFRL LEEPVEREES EGDRPALTFR ECIALHHVWF AYDEKNWVLK DLSLDIRMGE KIAIVGATGS GKTTIINILS GLYPYAQGSV TIDGTELKNI PGSSLRKLIG VVMQDVILFS GTLRENLAFS NPGIPDEKII EAARIVGADR FISQLPGGYG YRVKENGTGL SAGQKQLIAF VRALLYNPQI LVLDEATSSV DTETEQLIEA ATAKLMQGRT SIMIAHRLST VQKADRIMVM HKGVIRETGT HQELLAERGL YYKLYLLQHP DGR
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