Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0245 |
Symbol | |
ID | 6354702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 276001 |
End bp | 277476 |
Gene Length | 1476 bp |
Protein Length | 491 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642667874 |
Product | amine oxidase |
Protein accession | YP_001942319 |
Protein GI | 189345790 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTTC GTGAACTCAA CATCATTGTC ATCGGATCGG GTATCGGCGG TCTGGCGGCA GGAGCGATTC TGGCCGCAAA GGGCGCTGCC GTTACCGTTC TTGAAGCGCA GGACTATCCC GGCGGATGCG CCGCAACTTT TTTCAGAAAC GGTTACCGTT TCGATGCCGG AGCGACTGTG GGGTGCGGAT TTCATCCCGG CGGACCGATG TATGAACTGG GGCGCGAACT TGACATCAAC TGGCCCATAG AAGAAGAACC GGTTGCCTGG CAGTATCGTC ATAAGGAGCT GCATCTCGAT CTGACCCGTT CAGGAGATGC CGTTCTTCAG CGTTTTCCGC ATTCCGTATC GTTCTGGAAG GAACAGAAGC AGCTTGCCGG GTTGCTCTGG CAGCTTGCTT CAGGCGGCCT GTCATGGCCT CCCGAAACTC TTCGTGACCT TGCCGGGCTT CTTAGAAAAG GAGTTTCCGG TCTTTCCGGA GCAGGGCGTC TGCTCAAGTT TGCTCCCCGA ACGGCGTTGG CATGGCTTGC CGCGCATCAG CTCGATGCCG ATCAGGAATT TGTGCGTTTT ATCGATGCCC AGCTGCTGAT TTCTGTGCAA ACCACCTCAG CCTTTGCCGG CGCCATCAAT GCGGCCATCG CTCTCGACCT TCCCGCGGCA GGGGCCTGGC ATGTCAAAGG GGGGATAGGC TCCATAGCGG AGTTGCTTGC AGGGAGCATT ACAGATAACG GAGGAGCCGT GCTCTACAGG AAAAAGGTGA TCCGTATAGA TTCCGTCCGA AAGCAGGTGG TCGGTGTTGA AACCGGAGAC GGAAGCGCTT TTGCAGCTGA TATGGTGCTT GCCAACCTTA CACCGGAATC GCTTGCGGAG CTTCTTGACA GCCATTCGGC AGATCCGGCG GTGAAAAAGG GCCCAACAGC GGAATGGAGC GCCTTTATGC TCTATCTCGG GATGGATCCG TCCGTTTTCG AGGCTTCAGG AACCCATCAT CTGCAGATTA TCGGCAGCAG CGGCGAGCTT GGTGAAGGTA ACAGTATTTT CGTTTCAGTT TCGCCTCCGG CAGAAAGCGG GAGGGCGCCA GCAGGGCTTT GTGCCGTGAC GGTATCGACG CACAGCAGGC CCGGACCCTG GTTTGAGGCG CTCAATCGCG GAGGCGGGGA GTATCTGGAA CTGAAGAGGG CATATACCGA AAACGTGCTC GATCTCATGT CGTCGCAGTT TCCAGGAGTC CGCGGCGCAA TACGGTTTAT CGATGCGGCA ACGCCGGTTA CATGGCAGCG ATACACGGGA AGAAGCCGTG GCTATGTCGG CGGATACCCG CAAATCTCGC TTTTCGACGT TATAAGCCCT TCGACAGCGT TCGATAACAT GTTTCTTGTC GGCGATTCCG TTTTTCCCGG TCAATCTCTG CCTGGAGTGG TCACCGGAGC AAGGAGGGTG GTCGAGATGG TTTTAAAGAG TGCGGGAAGA ATGTGA
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Protein sequence | MDFRELNIIV IGSGIGGLAA GAILAAKGAA VTVLEAQDYP GGCAATFFRN GYRFDAGATV GCGFHPGGPM YELGRELDIN WPIEEEPVAW QYRHKELHLD LTRSGDAVLQ RFPHSVSFWK EQKQLAGLLW QLASGGLSWP PETLRDLAGL LRKGVSGLSG AGRLLKFAPR TALAWLAAHQ LDADQEFVRF IDAQLLISVQ TTSAFAGAIN AAIALDLPAA GAWHVKGGIG SIAELLAGSI TDNGGAVLYR KKVIRIDSVR KQVVGVETGD GSAFAADMVL ANLTPESLAE LLDSHSADPA VKKGPTAEWS AFMLYLGMDP SVFEASGTHH LQIIGSSGEL GEGNSIFVSV SPPAESGRAP AGLCAVTVST HSRPGPWFEA LNRGGGEYLE LKRAYTENVL DLMSSQFPGV RGAIRFIDAA TPVTWQRYTG RSRGYVGGYP QISLFDVISP STAFDNMFLV GDSVFPGQSL PGVVTGARRV VEMVLKSAGR M
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