Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0103 |
Symbol | |
ID | 6355627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 108050 |
End bp | 110536 |
Gene Length | 2487 bp |
Protein Length | 828 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642667727 |
Product | DNA gyrase, A subunit |
Protein accession | YP_001942188 |
Protein GI | 189345659 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000929696 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGCGCG AACGGATATT GCCGATCAGT ATTGAAGAGG AGATGCGGGA TTCCTATCTC GATTATTCCA TGTCGGTTAT CGTCAGCCGC GCGCTTCCTG ATGTTCGTGA CGGCCTGAAG CCGGTGCATC GCAGGGTGTT GTACGGTATG CACGAGCTGG GACTCCAGGC GGGCAAGCCG CACAAGAAGT CGGCCCGTAT TGTCGGTGAA GTGCTCGGCA AGTTCCATCC GCATGGCGAC AGTGCGGTCT ATGACAGTCT TGTACGACTG GTGCAGGACT TTTCCCTGCG CTATCCCCTG ATCGACGGTC AGGGAAACTT TGGTTCCGTC GATGGCGACT CCCCTGCTGC GATGCGTTAT ACCGAGGTGC GCATGAAGCC TATCGCCGGT GAAATGCTCA AGGATCTCGA TAAGGAGACA GTTGATTTTT CCCTTAACTT CGACGATTCG CTCGAAGAGC CTACGGTGCT TCCTTCAGCG ATACCTAACC TGCTCGTTAA TGGCTCATCC GGCATTGCCG TCGGCATGGC GACCAACATT CCTCCGCAGA ACCTGCGCGA GGTCGTTGAC GGCATCATCG CGGTCATAGA GAATCCCGAG ATCGAGATCG CCGATATCAT GAAGCACGTT ATCGCTCCCG ATTTCCCGAC CGGAGGGATC ATCTACGGTT ACGAAGGCGT TCGCCAGGCC TATCTGACAG GACGCGGCAA GGTGGTGATT CGCGCAAGGG CCCTTGTCGA GGTGACCCAG AAGAACGGCC GCGAGTCCAT TATCGTTACC GAACTTCCCT ATCAGGTCAA CAAGGTCCGT CTGATCGAGA AGATCGTCGA GCTTGTTCAC GATAAAAAAC TTGACGGTAT CGCCGACATC CGCGACGAGT CGGACCGTGA CGGCATGCGG CTCGTGATAG AACTCAAACG CGATGCCGTA GCCAAGGTGG TGCTGAACAA CCTGTACAAG CACACCCCTA TGCAGGAGAC CTTCGGGGTG ATCATGCTTG CCCTTGTGGA CGGCGTGCCG AGGGTGCTCA ATCTCAAGGA GATGATGCAC TACTATGTCA AGCACCGGAA CGAAATTGTG CTGCGCCGCA CGCAATTTGA CCTCACTGCC GCCGAAAAGC GGGCACATAT TCTTGAAGGT CTGAAAATCT GTCTCGATAA TCTCGACGAG GTGATCACCA CCATCCGCGA GTCGCCGGAC ACCTCTACGG CTCAGGAGCG TCTTATGGAG CGCTTCGGGC TTTCCGAGAT ACAGTCAAAG GCCATTCTTG AAATGCGTCT GCAGCGCCTT ACCGGCATGG AGCGGAAAAA GATCGATACG GAATATCAGG AAACCCTTCT TCTTATCGAC GGCCTGCGTT CCATTCTCGC CAGTCCGCAG AAACAGATGC AGATTATCCG CGAAGAGCTG CTGAAGGTGA GAGAGGTTTA CGGTGACGAG CGCCGTACTG AAATTGTGCC TCAGGAGGGT GATTTCTCCA TCGAGGATAT GATCGCCCAG GAGGATGTGG TCATCACCAT CACCCACGAC GGCTTTATCA AACGCTTTCC GGTTTCCGGA TACCGCCGTC AGGCAAGAGG TGGCAAAGGG GTTACCGGCG CGCAGGCGAA ACATGATGAC TTCATCGAAC ACATGTTCAT CGCCTCGACG CACAACTATA TTCTTTTCTT TACCAATACA GGTCGCTGTT ACTGGCTCAA GGTTTACGAA ATTCCCGAAG CGGGCCGAGC CGCCCGCGGA CGTTCGCTGG CCAACATCAT GGAGCTTCGC CCTACTGAAC AGATCAAGGC ATACATCAAT ATCCGCAACT TCGAGGATCC GGGGTACATT GTGATGGCCA CGACCAACGG TATCGTCAAG AAAACGCCCC TCGACGATTT CTCGAACCCG CGCAGAACAG GCATTGCCGC CATCACCATC GAAGAGGGAG ACGAACTGCT CGATGCCCGC CTGACCGACG GCGACCATCA GATCATTCTC GCGAAAAGCT CGGCCTATGC GGTGCGCTTT CCTGAAAACG AGATCCGTTC CATGGGCAGA ACCGCCATGG GCGTCAAGGG CATCACCCTC GACGAGGGAG AGAAGTGTAT TTCAATGGTC ACAACAAAGC GGACGGATAC CGCATTGCTC GCCGTTACCG ACAACGGGTT CGGCAAGCGC AGCCGTGTCG AGGACTACCG CCTTACCAGA AGAGGCGCAC GAGGAGTCAT TACCCTCAAG GCGCATGAGA AGATCGGAGC GCTGGTCGGT CTTATCGATG TCAATGACGA TGACGATCTC ATCATCATTA CCACGAACGG CATCGTGAAC CGCCAGCATG TATCGGATGT AAGGATGACC GGTCGGAATA CTTCAGGCGT AAGGCTTATC AGGCTTATGG CAGGCGACAA GATTTCAGCT CTGGCAAGGG TTCCGAAAAG TGATGAAGAG GTTGATTCCG ATTCCATCAT CGAGGATGCC GACGGTCAGA TTGATCTTTT TGTTTGA
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Protein sequence | MQRERILPIS IEEEMRDSYL DYSMSVIVSR ALPDVRDGLK PVHRRVLYGM HELGLQAGKP HKKSARIVGE VLGKFHPHGD SAVYDSLVRL VQDFSLRYPL IDGQGNFGSV DGDSPAAMRY TEVRMKPIAG EMLKDLDKET VDFSLNFDDS LEEPTVLPSA IPNLLVNGSS GIAVGMATNI PPQNLREVVD GIIAVIENPE IEIADIMKHV IAPDFPTGGI IYGYEGVRQA YLTGRGKVVI RARALVEVTQ KNGRESIIVT ELPYQVNKVR LIEKIVELVH DKKLDGIADI RDESDRDGMR LVIELKRDAV AKVVLNNLYK HTPMQETFGV IMLALVDGVP RVLNLKEMMH YYVKHRNEIV LRRTQFDLTA AEKRAHILEG LKICLDNLDE VITTIRESPD TSTAQERLME RFGLSEIQSK AILEMRLQRL TGMERKKIDT EYQETLLLID GLRSILASPQ KQMQIIREEL LKVREVYGDE RRTEIVPQEG DFSIEDMIAQ EDVVITITHD GFIKRFPVSG YRRQARGGKG VTGAQAKHDD FIEHMFIAST HNYILFFTNT GRCYWLKVYE IPEAGRAARG RSLANIMELR PTEQIKAYIN IRNFEDPGYI VMATTNGIVK KTPLDDFSNP RRTGIAAITI EEGDELLDAR LTDGDHQIIL AKSSAYAVRF PENEIRSMGR TAMGVKGITL DEGEKCISMV TTKRTDTALL AVTDNGFGKR SRVEDYRLTR RGARGVITLK AHEKIGALVG LIDVNDDDDL IIITTNGIVN RQHVSDVRMT GRNTSGVRLI RLMAGDKISA LARVPKSDEE VDSDSIIEDA DGQIDLFV
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