Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0077 |
Symbol | |
ID | 6355600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 82415 |
End bp | 84025 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642667700 |
Product | thiamine pyrophosphate protein domain protein TPP-binding |
Protein accession | YP_001942162 |
Protein GI | 189345633 |
COG category | [C] Energy production and conversion |
COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
TIGRFAM ID | [TIGR03336] indolepyruvate ferredoxin oxidoreductase, alpha subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAC ATCTTCTCCT TGGAGCCGAG GCCATTGCCG CCGGAGCTCT CGATGCCGGC ATATCCGGCG TTTACGCCTA TCCGGGAACA CCCTCGACCG AAATCACCGA ATACATCCAG AAAAGCCGGG AAACCGCTGA GCGGGGAATT CACGCAACAT GGTCGGCAAA CGAAAAAACC GCCTATGAAG CCGCTCTCGG CATGTCCTAC GCCGGAAAAC GCGCACTTTC GGCCATGAAG CACGTCGGGC TGAACGTCGC TGCCGACGCG TTCATCAACT CTGCCATAAC CGGCGTCAAC GGCGGCCTGG TGCTTGCCGT AGCCGACGAC CCGTCGATGC ACTCCTCGCA GAACGAACAG GACAGCCGTT TTTACGGCAG GTTCGCCATG GTGCCGGTAC TCGAACCGGC ATCGCAGCAG GATATCTACG ACGCTACGAT CTCGGCATTC GATCTTTCGG AATCCCTGAA ACTTCCGGTG CTGCTCCGGC TGACCACACG CCTTGCGCAC TCCCGCGCAG GAGTAACCCG CGCCATGCCG CGCGGAGAAA AACCCCTGCA TGCGGAATAT GCCCCCGAAC GGTTCGTGCT GATGCCGCAC AATGCGCGCA GGCAGTACGA GGGACTCCTC GGCAAACAGG AACCGCTGGA ACGGCTCTCC GGCTCGTCCC CGCTGAACAG GATGATCCCC GGAAACAGCT CCACAGGAGT GCTTGCCTGC GGCATAGCCT TCAACTATGC CATGGAAGCG AAAAAATCAT ACGGCCTCGA TATTTCCGTG CTCAAAATCG GCCAGTACCC CTTGCCCCGG CATCTGGTCG AAGAACTCTT CGCCAGATGC GAAACCGTGC TGGTCGCCGA AGAGGGATAC CCGATATACG AAGAGCTGCT CAGAGGATGG TTCGACGACC GGAACATCCG CGGACGCCTG GACGGAGCGC TGCCCCGTGC CGGCGAACTC ACGACCGGCC TGCTCGCCGA AGCGCTTGGG GTAAAACGCC GGGAAACGGC AACGGTTCCC GACATCGTCG TAAACCGCCC GCCCGGGCTC TGCAGGGGAT GCGGACACCG CGATCTCTTC GAAGCCCTGA ACCGGGTCAT GGAGGGTTTC GAAAACAGGC ACGTCTTTTC CGACATCGGC TGCTACACGC TTGGAGCCCT GCCCCCATAT AACGCCATCC ACACCTGCGT TGACATGGGA GCGGCAATCA CCATGGCAAA AGGAGCTTCC GACGCCGGCC TTCGCCCTGC CGTCTGCGTC ATAGGCGACT CCACCTTCAC CCATTCAGGC ATGACCGGCC TGCTCGACGC CGTCAACGAA CGGACGCCGA TCACGGTCAT CATTGCCGAC AACGACACCA CCGCCATGAC AGGAGGACAG GCCTCGGCAG CTACGGGATC GAAACTCCAT GCCATCTGCC GCGGCCTCGG CGTAGCAGAA AACCGCATAA GAACGATCAT CCCCCTGAAA CAGAACCTGG AAAAAAACAT GACGACGCTC AGGGAGGAAA TCGAATTCCC CGGCGTTTCG GTGGTACTCG CGGTCAGGGA GTGCATAGAA ACCGCTGCCC GGAAAAAACG CAGATCCGGA AGCAAACCAG CCAATCAGTA A
|
Protein sequence | MKKHLLLGAE AIAAGALDAG ISGVYAYPGT PSTEITEYIQ KSRETAERGI HATWSANEKT AYEAALGMSY AGKRALSAMK HVGLNVAADA FINSAITGVN GGLVLAVADD PSMHSSQNEQ DSRFYGRFAM VPVLEPASQQ DIYDATISAF DLSESLKLPV LLRLTTRLAH SRAGVTRAMP RGEKPLHAEY APERFVLMPH NARRQYEGLL GKQEPLERLS GSSPLNRMIP GNSSTGVLAC GIAFNYAMEA KKSYGLDISV LKIGQYPLPR HLVEELFARC ETVLVAEEGY PIYEELLRGW FDDRNIRGRL DGALPRAGEL TTGLLAEALG VKRRETATVP DIVVNRPPGL CRGCGHRDLF EALNRVMEGF ENRHVFSDIG CYTLGALPPY NAIHTCVDMG AAITMAKGAS DAGLRPAVCV IGDSTFTHSG MTGLLDAVNE RTPITVIIAD NDTTAMTGGQ ASAATGSKLH AICRGLGVAE NRIRTIIPLK QNLEKNMTTL REEIEFPGVS VVLAVRECIE TAARKKRRSG SKPANQ
|
| |