Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0054 |
Symbol | |
ID | 6355577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 60329 |
End bp | 61579 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642667678 |
Product | DNA methylase N-4/N-6 domain protein |
Protein accession | YP_001942140 |
Protein GI | 189345611 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.549481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCTGC TGCCTGACAG TTCGGTTCAC CTTGTCATTA CCTCTCCTCC CTACTGGCAG CTCAAGGACT ACGGGACGGA GAACCAGATC GGATTTCACG ACAGCTATGA GAGCTACATC AACAATCTGA ATCTTGTCTG GAGCGAGTGC GAACGGGTGC TGCATCCCGG CTGCAGGCTC TGCATCAACA TCGGCGACCA GTTCGCCCGT TCGGTGTATT ACGGCCGGTA CAAGGTTATC CCGATCCGGA CGGAGATCAT CAGGTTCTGC GAGACTATCG GTTTCGACTA CATGGGCGCG GTGATCTGGC AGAAGGTGAC CACAACCAAC ACCACTGGCG GGGCATCCAT TATGGGAAGC TTCCCGTATC CGCGCAACGG CATTCTCAAG CTCGATTATG AGTTCATTCT CCTGTTCAAA AAGCCGGGAG ATGCGCCCAA GCCGGCAAAA GAGCAGAAAG AGCGCTCCGC CATGAGCACC GAAGAGTGGA ACACCTGTTT CTCCGGACAC TGGAACTTTG CCGGAGCAAA GCAGGATGGC CACATCGCCG TGTTTCCGGA AGAGCTTCCG CATCGCCTGA TCAGGATGTT CGCATTCAGC GGAGAAACGG TGCTCGATCC GTTCATGGGC AGCGGGACTA CCAGTCTTGC GGCAAAAAAC CTCGACAGGA ACTCGGTCGG CTACGAAATC AATCCCGAGT TTATCGGAAT AGCAAAAGAG AAACTCCGTG CCAACCAGAC GGACTTTGCC GGAACGGAGT ATATTTTTCA GCACGATGTC CTGAAGGGGG ATATTTCCGA AATGATCGAG CGTCTTCCTT ATCGTTTTCA AGACCCCCAC AAACTCGACA AGAAAATCGA CCCACGAAAG CTGACGTTCG GATCAAGAGT AGAAAAGGGT AGCGGGGCAA AACAGGAAGA GACGTTTATC GTCAGGGAGA TTCTAAGCCC CGAGATGGTC AGATTGTCCA ACGGCCTGAC GGTGAGGCTG ATCGGAGTGA AGGAAGAACC TTTTACGCGG GAAAAAGCTG TCGGGTATCT CGTTGACAAG ATCAAGGGAA AACGGATTTT CATGAAGTAC GACAGCATGA AATACGATGG GGGGGACAAT TTGCTCTGTT ACCTCTATCT GGAAAACAAG ACGTTTGTCA ACGCGCATCT GATCAAGAGC GGTTTAGTCG GGATTGACGG CAGCTACGAT TATAAATACC GGAGCAAATT TCAAACTTTT TCCGAACAGG TCAATGGCTA A
|
Protein sequence | MNLLPDSSVH LVITSPPYWQ LKDYGTENQI GFHDSYESYI NNLNLVWSEC ERVLHPGCRL CINIGDQFAR SVYYGRYKVI PIRTEIIRFC ETIGFDYMGA VIWQKVTTTN TTGGASIMGS FPYPRNGILK LDYEFILLFK KPGDAPKPAK EQKERSAMST EEWNTCFSGH WNFAGAKQDG HIAVFPEELP HRLIRMFAFS GETVLDPFMG SGTTSLAAKN LDRNSVGYEI NPEFIGIAKE KLRANQTDFA GTEYIFQHDV LKGDISEMIE RLPYRFQDPH KLDKKIDPRK LTFGSRVEKG SGAKQEETFI VREILSPEMV RLSNGLTVRL IGVKEEPFTR EKAVGYLVDK IKGKRIFMKY DSMKYDGGDN LLCYLYLENK TFVNAHLIKS GLVGIDGSYD YKYRSKFQTF SEQVNG
|
| |