Gene Clim_0031 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0031 
Symbol 
ID6355554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp34568 
End bp36433 
Gene Length1866 bp 
Protein Length621 aa 
Translation table11 
GC content56% 
IMG OID642667656 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_001942118 
Protein GI189345589 
COG category[C] Energy production and conversion 
COG ID[COG1274] Phosphoenolpyruvate carboxykinase (GTP) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTA TGCCGATCAA TCCCCCGGAT TTTGTTAAAA ACCCGAAACT GCTCCAATGG 
GTGCAGGAAA CAGCCGATCT TTGTCGGCCG GATTCCGTTT ACTGGTGCGA CGGAAGCCAG
GAAGAGTACG ATACGCTCTG TCAGCAGATG GTCGAGAGCG GAACCTTTAT AAGGCTTTCC
GAAGAAAAGC GCCCGAACAG TTTTCTCTGC CGTTCCGATC CGAGCGATGT CGCCCGTGTG
GAGGATCGTA CCTATATCTG CAGTATCCGT CGCCAGGATG CCGGACCGAC CAATAACTGG
GTTGCTCCGA AGGAGATGAA AGAGACCCTT CGCGGACTTT TTGACGGCTG CATGCAGGGG
CGTACCATGT ATGTGATTCC ATTCAGCATG GGCCCCCTCG GCTCTCCGAT TGCCCATATC
GGCGTGGAGA TTACCGATTC CCCCTATGTA GTAACCAACA TGCGCATCAT GACCAGAATG
GGCAGCAACG TGCTCGATGT GCTCGGCGAC GGCGGTGAAT TCGTTCCCTG CCTTCATTCG
GTAGGCGCTC CCCTTCAGCC GGGGCAGCAG GATGTTCCCT GGCCGTGCAA CGACAGGAAA
TACATTGTCC ATTTCCCTGA AGAGCGCTCC ATTATGTCGT TCGGCAGCGG ATACGGCGGC
AATGCCCTGC TCGGCAAAAA GTGTTTCGCT CTTCGTATCG CCTCCTCTAT GGCCCGCGAT
GAAGGATGGC TTGCCGAGCA CATGCTTATT CTTGGCGTCG AGTCGCCCGA AGGAGAAAAG
ACCTATGTCG CAGCTGCATT CCCGAGCGCC TGCGGTAAAA CCAACTTCGC CATGCTGATT
CCGCCCACAT CCTATGAAGG CTGGAAAGTT ACCACTATCG GCGACGATAT CGCCTGGATC
AAGCCGGCGG AAGACGGACG TCTCTACGCC ATCAATCCCG AGTACGGCTT TTTCGGGGTC
GCACCGGGAA CATCGAATAA ATCGAATCCG AATGCCATGG CTTCCCTGGC AAGCAACTCG
ATATTCACCA ACGTGGCACT GACGCCGGAA GGCGATGTCT GGTGGGAAGA TATGACCGAT
ACGGTTCCTC CGGAACTGAC CGACTGGCAG GGAAACCCCT GGACACCGGG TTGCGGACGT
CCGTCGTCAC ATCCGAATGC GCGCTTCACC TCCCCTGCAA GTCAGTGCCC ATCTCTCGAC
GCCGACTGGG AGAATCCTGC CGGAGTGCCG ATCAGCGCAT TTATTTTCGG TGGTCGCCGC
AGGGATACCG TGCCGCTTGT TTACCAGTCC GCAAACTGGA ATTCCGGAGT TTACCTCGCC
GCGACCATGG GATCCGAAAA AACAGCGGCA GCTGCGGGCA AGATCGGAGA AGTCCGTCGT
GATCCCTTTG CCATGCTTCC GTTCTGCGGT TATCACATGG GAGATTATTT CAACCATTGG
CTCCATGTCG GCCGGACTCT TTCCGAACTG CCGAGAATTT TCGGGGTCAA CTGGTTCCGA
AAGGATGAGA ACGGCAAGTT TCTCTGGCCT GGCTTTGGCG AGAACATGCG CGTACTGAAG
TGGATTGTCG ATCGTGTGCA CGGAAGGGCT GGCGCCGTCG AGAGCCCGCT TGGCTGGATG
CCGAAGTATG AAGCGCTCGA CTGGGAAGGT CTCGATGAGA TGACCCAGGA AAAGTTCTCA
AAGCTCATGT CTGTAGACCG CGAAGCATGG AAAAAAGAGC TGCTCTCGCA CGAGGAGCTG
TTCGAAATAA TCTATGATCG ACTGCCGAAA GAGTTCTCGC ACATCAGGGA ACTGATGCTC
TCGACGCTCT GGATGTCACC CGAGCACTGG TCTCTTGCTC CGGAGTGCTA CTCCGTCGAT
CACTGA
 
Protein sequence
MSVMPINPPD FVKNPKLLQW VQETADLCRP DSVYWCDGSQ EEYDTLCQQM VESGTFIRLS 
EEKRPNSFLC RSDPSDVARV EDRTYICSIR RQDAGPTNNW VAPKEMKETL RGLFDGCMQG
RTMYVIPFSM GPLGSPIAHI GVEITDSPYV VTNMRIMTRM GSNVLDVLGD GGEFVPCLHS
VGAPLQPGQQ DVPWPCNDRK YIVHFPEERS IMSFGSGYGG NALLGKKCFA LRIASSMARD
EGWLAEHMLI LGVESPEGEK TYVAAAFPSA CGKTNFAMLI PPTSYEGWKV TTIGDDIAWI
KPAEDGRLYA INPEYGFFGV APGTSNKSNP NAMASLASNS IFTNVALTPE GDVWWEDMTD
TVPPELTDWQ GNPWTPGCGR PSSHPNARFT SPASQCPSLD ADWENPAGVP ISAFIFGGRR
RDTVPLVYQS ANWNSGVYLA ATMGSEKTAA AAGKIGEVRR DPFAMLPFCG YHMGDYFNHW
LHVGRTLSEL PRIFGVNWFR KDENGKFLWP GFGENMRVLK WIVDRVHGRA GAVESPLGWM
PKYEALDWEG LDEMTQEKFS KLMSVDREAW KKELLSHEEL FEIIYDRLPK EFSHIRELML
STLWMSPEHW SLAPECYSVD H