| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_a021 |
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| Symbol | |
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| ID | 7409797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012040 |
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| Strand | + |
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| Start bp | 23627 |
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| End bp | 25423 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 643718716 |
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| Product | conjugal transfer protein TraG/VirD4 |
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| Protein accession | YP_002576145 |
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| Protein GI | 222778508 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATA AGATTGTAAT GCTTGTTTTT ATAAGTCTTT TTTCACTATT AATAGCTTAT
TTTTTAAGTC CTTTTGTGAT GTTTTATCTT AATGATGTAA GCTTAAAAAG AATTCTTGGG
TTTTACAATC TTAAATTCAC TTTTGAGGCA TTAATAAATG CTTACCCAAA AGCTTATATT
TCTTTCTTTG GTATGTTTGG TTTTAGTGTT ATTGTTTTAA TGCTTTTAGC GTTAATAGCT
AAAAGCAAAA AAACTCAATT TGGCGAGGCA AGATTTGCAA ATTTAGCAGA AATTAAAAAA
ATGAAATTAT TTTCAGACAA TGGAATAATC ATCGGAAAAT ATAAGGGAAA ATTTTTAAGA
TTTAAAGGGC CTCAGTTTGT GGCTTTGGGA GCTCCAACAA GAAGTGGTAA AGGGGTTGGT
ATTGTAATAC CAAATTTAAT GGACTGGAAA GAGAGTGCTG TTGTTCAGGA TATAAAACAA
GAATGTTTTG ATTTTACAAG TAAATATAGA AAAGAAGTTT TGGGTCAAGA TGTTTTTCTT
TTTAATCCAT TTTCAAAAAG AACTCATCGT TACAACCCTT TAACTTATAT AGATATGAGT
GATAGTGATA ATTGTGATAG TCAGTTAATG GATTTAGCAA ATATCATTTA TCCAAAAGAA
GGGGATTCTA CAACTCAATT CTTTAATGGT CTTGCACAAA ACCTATTTAT AGGACTTTGT
TATTTGTGGA AAGATTTAAA TTTAAAAGAA GATGGGAAAC TTTTTTTAGA AACATTTAAC
TTAAAAACAG AATTTAGTTT TTTTGGAATA TTACAACTTT CAAAAGGTTT TACTTTTGAA
TATGAGGGTA AAAAAATAAA TGGATTTGAT AATACTTATA AGTACTTATC AAATTGTGAT
GATCTACTTT CAGATATCAC CAAAAGAAGG CTAGAGACTT ATTTTAGTAT TTCAAGTGAT
AATACAAAAT CAGGAGTTAT GTCTTCTTTT AACGAGCCTT TAACCCCTTT TGAAGCAGAG
GTATTAAAAC TTTCTACTCA AACTAGTGAT TTTGATTTGA GAGATTTACG CAAAAAGAAA
ATGACTATTT ATATAGGCAT AACCCCTGAT CAATTAACTA ATGCAAAATT TATATTAAAT
ATTTTTTGGT CGCAGTTAAT TCTTTTGAAT ACAAAAGAAC TTCCTGAACA AAATCCACAA
ATTAAATATA CTTGTTTAAT GCTTATGGAT GAATTTACAG CACCTAGAAA AATTCCTATA
TATCTTTCAG CAGTAAGTTT TATGGCAGGT TATTTAATGC GTTCTTTGAT GATTTATCAA
TCAAAATCTC AACTTAAAGC ACCTGCCCCT GATGGATATG GGGATGATGG AGCAAAAACT
CTTTTGACTA ACCATGCTTG TCAAATTTTT TATACCCCAA GAGAGCAAGA AGATGCAGAG
GAGATTAGTA GAATACTTGG TAATACTACA TTTAAAACAA GATCAAGAAG TGTAGGGGCA
AGTGGTGGAT CTACAAGTTA TAGTGAAGCA AGTAGGGCAT TAATGCTTCC ACAAGAACTT
CGAGAAATGT CTTTTGAAGA TGAGCTTATT ACTATAGATA ATGGAAAGCC TATTTTATGC
AAAAAAGCTT TTTATTATAA CGATCCATAT TTTATTGATA AGTTTAAACA AGTCTCTCCA
ACTTTGGCAA AAATTAAAGG CATACCTAAA GAACATATCT TAAAAGGAGC TTTTCAAAGA
GGAGAGTGTC GCATACAAAT ACCAACAACA GGAGAAAATA ATGAAAAAAA CGCTTAG
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| Protein sequence | MKDKIVMLVF ISLFSLLIAY FLSPFVMFYL NDVSLKRILG FYNLKFTFEA LINAYPKAYI
SFFGMFGFSV IVLMLLALIA KSKKTQFGEA RFANLAEIKK MKLFSDNGII IGKYKGKFLR
FKGPQFVALG APTRSGKGVG IVIPNLMDWK ESAVVQDIKQ ECFDFTSKYR KEVLGQDVFL
FNPFSKRTHR YNPLTYIDMS DSDNCDSQLM DLANIIYPKE GDSTTQFFNG LAQNLFIGLC
YLWKDLNLKE DGKLFLETFN LKTEFSFFGI LQLSKGFTFE YEGKKINGFD NTYKYLSNCD
DLLSDITKRR LETYFSISSD NTKSGVMSSF NEPLTPFEAE VLKLSTQTSD FDLRDLRKKK
MTIYIGITPD QLTNAKFILN IFWSQLILLN TKELPEQNPQ IKYTCLMLMD EFTAPRKIPI
YLSAVSFMAG YLMRSLMIYQ SKSQLKAPAP DGYGDDGAKT LLTNHACQIF YTPREQEDAE
EISRILGNTT FKTRSRSVGA SGGSTSYSEA SRALMLPQEL REMSFEDELI TIDNGKPILC
KKAFYYNDPY FIDKFKQVSP TLAKIKGIPK EHILKGAFQR GECRIQIPTT GENNEKNA
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