Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1559 |
Symbol | cmeA |
ID | 7411305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1510587 |
End bp | 1511684 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643718680 |
Product | RND efflux system, membrane fusion protein CmeA |
Protein accession | YP_002576110 |
Protein GI | 222824536 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 60 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA AACTTTTAAC TCTAGCTTGT GCTTCGCTTA TATTTGTAGC ATGTTCAGAT GATAAAAATG CACAAGTTAA ACAACTCCCT CCTCAACCTG TAAATATTAT GACTATGCAA AGTGCTAATT TACCTTTAGA ATTTACTTAT CCTGCAAGAT TAAGCACGGA TTTAGATGTG ATAATCAAAC CTAAAGTAAG TGGTGAAATC AAAGCAAAAT ATTTCAAAAG TGGCCAAGCT GTTAAAAAAG GCGATAAACT TTTTCTTATA GAGCCTGATA AATATCAAGC AAGTGTAAAT ATGGCCTATG GAGACGCTTT AGTCGCAAGA GCAAATTTTG ATGATGCTGA AAAAAATTTC AAAAGAGATC AAATTCTAAT AGAAAAAAAT GCTATTTCAC AAAAAGAATT TGATGCAAGT TTAGCCAAAT TTAATTCAGC AAAAGCAAAT TTAGAAAGCG CTAGAGCAAA ACTTGCCAAT ACTAGATTAG ATTTAAAATA CACTGTAGTA AGCGCTCCAT TTGATGGAGT TTTAGGTGAT GCACTAATGG ATGTAGGCGA TTATGTAAAT GCTTCATCAA CTGAGCTTGT GCGTATTACT AATATCAATC CCATCTTTGC AGACTTTTAT ATTTCTGATG TTGACAAAAT TAGTATGAAT AAAAATATAA AAAATGGTAA TTGGCAATTA GACAATATCC AAGTACAAGC TAATGTTGGC GGTGAACTTT TTAATGGAAA ATTATATTTT ATAGATAGTG TTATAGATAC AAACAGTGGT GGAGTAAAAG CGAAAGCTAT TTTTGACAAC AATAACTCAA ATTTAATGCC TGGTTCTTTT GCAAATGTCC ATGTTGGTGG TTTTGTTCAA AAAGATGGCT TTGAAATTCC ACAAGTTGCA CTATTGCAAG ATGATAGTGC TACTTATGTT TATACTTTAG TAGATGGAAA AGTAGTTAAG AGCATCGTTA ATGTAATCTT TCAAACTTCA GATAAAGCAA TCATTGACAA GGGCTTAAAA AATGGTGATA AAGTGATTTT AAATAACTTC AAAAAAATCC GTCCTGGTGC AAGCGTTAGC GTAATGGAGA ATAAATAA
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Protein sequence | MKTKLLTLAC ASLIFVACSD DKNAQVKQLP PQPVNIMTMQ SANLPLEFTY PARLSTDLDV IIKPKVSGEI KAKYFKSGQA VKKGDKLFLI EPDKYQASVN MAYGDALVAR ANFDDAEKNF KRDQILIEKN AISQKEFDAS LAKFNSAKAN LESARAKLAN TRLDLKYTVV SAPFDGVLGD ALMDVGDYVN ASSTELVRIT NINPIFADFY ISDVDKISMN KNIKNGNWQL DNIQVQANVG GELFNGKLYF IDSVIDTNSG GVKAKAIFDN NNSNLMPGSF ANVHVGGFVQ KDGFEIPQVA LLQDDSATYV YTLVDGKVVK SIVNVIFQTS DKAIIDKGLK NGDKVILNNF KKIRPGASVS VMENK
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