Gene Cla_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1387 
SymbolbioF 
ID7409893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1335633 
End bp1336757 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content28% 
IMG OID643718509 
Product8-amino-7-oxononanoate synthase 
Protein accessionYP_002575954 
Protein GI222824380 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTG CACAAATTTT AGATGAGTTA AAGCAACAAG ATAATTTTAG AATTCTACGC 
TCATTGAAAC ATGAGGGAAA ATATGTTATT TATAATGAGC AAAAATTGCT AAATTTAGCG
AGTAATGATT ATTTAAATTT AAGCAATGAA AAAGCATTGA AGCAAGATTT TTTAACGCAT
TTAAAAGAAT TTGAATTTTC TAGTTCAAGT TCTAGAAGCT TGAGTGGAAA TTATGAAATT
TTTGAAGAAT TTGAAAGCTT TTTAGAAAAT AAATTTCATA AAAAAATTCT TCATTTTAAT
AGTGGTTATG CTTTAAATAC AAGCTGTTTG CAAGCTTTAG GACTTTTAAA AAATACTTTG
TTTTTAGCTG ATAAACAAGT TCATGCAAGC ATTATTGATG GTTTAAGGCT TAGTGGGGCT
AAATTTTTTC GTTTTAAACA CAATGATATA AAGCATTTAC AAAGCTTAGT GCAAAAATAT
CATAAAGAAT TTGAAAATAT CATCATTATA AGTGAAGCTT TATTTAGCAT GGATGGAGAT
TTTGCGCCTA TAAAAGAATT TATAAACTTA AAAAAAGAAT ACAAAAATAT CAAAATTTAC
ATTGATGAAG CCCATAGTAT AGGGTGCTTT GGTGATGATG GCTTGGGTTA TGTGAAATTT
TTGGGTTTAG AAAAAGAGAT TGATTTTTTA GTATTTACTT TTGGCAAGGC TATTTCTTCT
ATGGGTGCTT GTATGATAAG TGATGAAAAA GAATTTTTTA TAAATAAGGC TAGAGCTTTT
ATATACTCAA CTGCTATTGC GCCGATAAAC GTAGCTTGGA CTTTGCATGT ATTTAAGCAT
TTGCACAAAT TTAACACTCA AAGAAATGAG CTTTTAAAAT TAAGCGCTTG GTTTAAAAAT
GCTTTAGCAA GCAAAGGAGA GATTTTAGGT GAAGCTTATA TAATATCTTT GATTTTAGGA
CAAAATGATT GGGCTAGTAA AACTTTTGAT AAGCTTTTAA AAAATGGCTT TTTTGCACCA
GCTATAAAAG AACCAACTAT ACCAAAAAAT ACTGCTAGGA TTAGATTTTC TTTGCATAGT
GGATTAAAAA AAGATGATTT AGAAAAAATT TTGGAGTTAT TTTGA
 
Protein sequence
MQIAQILDEL KQQDNFRILR SLKHEGKYVI YNEQKLLNLA SNDYLNLSNE KALKQDFLTH 
LKEFEFSSSS SRSLSGNYEI FEEFESFLEN KFHKKILHFN SGYALNTSCL QALGLLKNTL
FLADKQVHAS IIDGLRLSGA KFFRFKHNDI KHLQSLVQKY HKEFENIIII SEALFSMDGD
FAPIKEFINL KKEYKNIKIY IDEAHSIGCF GDDGLGYVKF LGLEKEIDFL VFTFGKAISS
MGACMISDEK EFFINKARAF IYSTAIAPIN VAWTLHVFKH LHKFNTQRNE LLKLSAWFKN
ALASKGEILG EAYIISLILG QNDWASKTFD KLLKNGFFAP AIKEPTIPKN TARIRFSLHS
GLKKDDLEKI LELF