| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1376 |
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| Symbol | cdtA |
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| ID | 7409882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1326145 |
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| End bp | 1326957 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 643718498 |
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| Product | cytolethal distending toxin, subunit CdtA |
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| Protein accession | YP_002575943 |
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| Protein GI | 222824369 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 59 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAAA TTAAATTTAT AATGATGTTA AGTGCATTGA TGATATTGTT TATTGGATGT
TCTTCTAAAG AACAAATTAA TCCTTTAGGA CGCTCTTTAG GTAAGATGAA TGATAATGAT
CCTTTGAAAA TAGGTAAAAA TCCAACTCCA CCTGCTAAGC AAAAAATACC AGCTTTAGTA
GAAGGTAAGC ATTTTCCTGC TATACCACTT GTACCACCAA TAATTACTAC AAATACTTTT
AAAGGGGATA ATTCTATCAA AGGACCGCTT CCAAGACTTA CTTCAAATAA CGAGCTTGCT
CAAAATACTT TATATGAAAA CATAGGATTT GTAAGTGATT TTGTGACTAT TATGAATCCA
AATGGAGCCG CATTAACAGT TTGGGCCTTA AATCCAGGTA ATTGGATATG GGGTTATAGT
TTATTTAATA GTAAGACTTT TGGTGATGCG AGGGTCTGGC AGCTGATTGA ATTTCCAAAT
AATACTGTGA TGATTAAAAA TGCAAAAACT TTAACTTGTT TAACAGCTTA TGGAAATGGT
ATAGTTCATT ATCCTTGCGA TCAAAGTAAT CATGCGCAAT TTTGGAGATT TTTTCCTATG
AGTAATGGTG CTTATCAAAT TCAAAATTAT GCCACTCAAC AATGTATACA AACAACAGTT
TCAAATGTGA TGGAAGAATT TAATTTTAAT TATTACAGTA TCTTTTTAAC TTCATGTTTA
AAACCAAGAG AAAAAAATTT AGATAGACAA TGGAGTGTTA GTGCACCAGC TTTTCAAACA
ATATCACCTT ATGCTTATAC AGGAGAGCAA TGA
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| Protein sequence | MQKIKFIMML SALMILFIGC SSKEQINPLG RSLGKMNDND PLKIGKNPTP PAKQKIPALV
EGKHFPAIPL VPPIITTNTF KGDNSIKGPL PRLTSNNELA QNTLYENIGF VSDFVTIMNP
NGAALTVWAL NPGNWIWGYS LFNSKTFGDA RVWQLIEFPN NTVMIKNAKT LTCLTAYGNG
IVHYPCDQSN HAQFWRFFPM SNGAYQIQNY ATQQCIQTTV SNVMEEFNFN YYSIFLTSCL
KPREKNLDRQ WSVSAPAFQT ISPYAYTGEQ
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