| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1149 |
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| Symbol | thiF |
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| ID | 7410883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 1098035 |
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| End bp | 1098832 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 643718275 |
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| Product | thiamine biosynthesis protein ThiF |
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| Protein accession | YP_002575722 |
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| Protein GI | 222824148 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
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| TIGRFAM ID | [TIGR02354] thiamine biosynthesis protein ThiF, family 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0000110097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATTA AATTTAATGG AAGTGTGATA GATACGCATT TTAAAAATAC TTTGGATTTT
TTTCAAAGTG TGAGTAAAAA TGAAAATGAT GTATGGATAG TCAATGGTTT TGCAACAAAA
GATAATTTGG AACTAAAAGA AAATGATGAG CTTTTTTGTA TAGAAAAAAA TACTTTACCA
CCATATGAAG CTCTTGATGC GATGATGAGG GCAAGACATA CTCCAAAGCT TCATGATAAA
CTTAAAAAGG CAAGTGTGGC AGTGTGTGGG CTTGGTGGGC TTGGCTCGCA TATAGCTATA
AATTTAGCAA GAAGTGGAGT TGGTAGGCTT CATTTGATTG ATTTTGATGT GGTGGAGCCA
AGCAATCTTA ACCGCCAAGC TTATATGGTG GAAGATTTGG GTAAATTTAA GGCTGAAGCT
TTAAAAGATC AAATTGCTAA AATTAATCCT TTTATAGAGG TATTTGCGCA AGTTTTAAAA
ATAGAAAAAG AAAATATAAC TAATCTTTTT ACTAATGATG ATATAGTTTG CGAAGCTTTT
GATAATGCAA AATATAAAGC TCTTTTAGCG CAAAATTTTC ACCAACACTA TCCTCAAAAA
ACATTAATTT GCGCTTCTGG TTTAGCAGGA TATGGCGATA GCAACAGCAT ACAAACAAAA
AAAATTGCAA AAAACTTTTA TGTTTGTGGT GATTTAAAAA ACGAGGCAAA AGTAGGTAAT
GGACTTATGG CTCCGCGTGT AAATATTTGC GCAGGACATC AAGCAAATTT AGTTTTAGAA
CTTTTAGCGA GTGAGTAA
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| Protein sequence | MKIKFNGSVI DTHFKNTLDF FQSVSKNEND VWIVNGFATK DNLELKENDE LFCIEKNTLP
PYEALDAMMR ARHTPKLHDK LKKASVAVCG LGGLGSHIAI NLARSGVGRL HLIDFDVVEP
SNLNRQAYMV EDLGKFKAEA LKDQIAKINP FIEVFAQVLK IEKENITNLF TNDDIVCEAF
DNAKYKALLA QNFHQHYPQK TLICASGLAG YGDSNSIQTK KIAKNFYVCG DLKNEAKVGN
GLMAPRVNIC AGHQANLVLE LLASE
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