Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_1112 |
Symbol | livH |
ID | 7410846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 1063622 |
End bp | 1064518 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643718238 |
Product | branched-chain amino acid ABC transporter, permease protein |
Protein accession | YP_002575685 |
Protein GI | 222824111 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAGTT CTTTAATTTT ACAGCAAGTT ATAAATGGTT TTAGCTTGGG CAGTATGTAT GCACTTATTG CTATAGGCTA TACAATGGTC TATGGTGTTT TAAGATTAAT TAATTTTGCG CATGGTGATA TCATGATGGT AGGTGCATAC TCAGCTTTAT TTTGTGTTAC AAGTATGAAT GTGCCTTTTT TAGGAGCTCT TTCTTTAGCT ATGTTATTTG CGGCAGCTTT AGGTATAGCT ATTGACAGAG TAGCTTATAA ACCTCTAAGA AAAGCACCTA GAATTTCTTT ACTTATTACA GCCATAGGTA TAAGCTTCTT AATACAAAAT GTATTTAATG TCTTATTTGG CTCAACACCA AAATATTTTC CTGTACCAAG TTATCTTGAA ACGGTGATTA ATTTTAATAA TATCAGTATT AGTATTAATA ATATTTTAGT GCCTATCTTA ACATTTTTTA TACTATTAGT GGTTTTATTT ATACTCTATA AAAGCAAATA TGGCATTGCT ATTAGAGCTT TAGCTTTTGA TATTCATACT GTAAATTTAA TGGGAATTGA TGCAAATCGT ATTATCGCTA TTGTATTTGC ATTAGGCTCA GCTTTAGCTG CTATTGGTGG TATTTTTTGG GCCGTTAGTT ATCCTTCTGT TGAACCTAGC ATGGGAACTC TTATAGGGCT TAAAGCTTTT GGAGCTGCGG TTTTAGGTGG TATTGGTTCG GTTGCTGGAG CTGTTTTAGG TGGTTTGATT ATAGGATTTA CAGAAGTTGT TGTTGTTGCT ATTTTTCCTG ATCTTTCTGG TTTTAAAGAT GCTTTTGCGT TTATCTTTTT AGTATTGATT TTGCTTTTTA AACCAACTGG AATTTTGGGT ATAAATTTTG AAAAAAGTAG GTTTTAA
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Protein sequence | MDSSLILQQV INGFSLGSMY ALIAIGYTMV YGVLRLINFA HGDIMMVGAY SALFCVTSMN VPFLGALSLA MLFAAALGIA IDRVAYKPLR KAPRISLLIT AIGISFLIQN VFNVLFGSTP KYFPVPSYLE TVINFNNISI SINNILVPIL TFFILLVVLF ILYKSKYGIA IRALAFDIHT VNLMGIDANR IIAIVFALGS ALAAIGGIFW AVSYPSVEPS MGTLIGLKAF GAAVLGGIGS VAGAVLGGLI IGFTEVVVVA IFPDLSGFKD AFAFIFLVLI LLFKPTGILG INFEKSRF
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