Gene Cla_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1112 
SymbollivH 
ID7410846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp1063622 
End bp1064518 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content32% 
IMG OID643718238 
Productbranched-chain amino acid ABC transporter, permease protein 
Protein accessionYP_002575685 
Protein GI222824111 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTT CTTTAATTTT ACAGCAAGTT ATAAATGGTT TTAGCTTGGG CAGTATGTAT 
GCACTTATTG CTATAGGCTA TACAATGGTC TATGGTGTTT TAAGATTAAT TAATTTTGCG
CATGGTGATA TCATGATGGT AGGTGCATAC TCAGCTTTAT TTTGTGTTAC AAGTATGAAT
GTGCCTTTTT TAGGAGCTCT TTCTTTAGCT ATGTTATTTG CGGCAGCTTT AGGTATAGCT
ATTGACAGAG TAGCTTATAA ACCTCTAAGA AAAGCACCTA GAATTTCTTT ACTTATTACA
GCCATAGGTA TAAGCTTCTT AATACAAAAT GTATTTAATG TCTTATTTGG CTCAACACCA
AAATATTTTC CTGTACCAAG TTATCTTGAA ACGGTGATTA ATTTTAATAA TATCAGTATT
AGTATTAATA ATATTTTAGT GCCTATCTTA ACATTTTTTA TACTATTAGT GGTTTTATTT
ATACTCTATA AAAGCAAATA TGGCATTGCT ATTAGAGCTT TAGCTTTTGA TATTCATACT
GTAAATTTAA TGGGAATTGA TGCAAATCGT ATTATCGCTA TTGTATTTGC ATTAGGCTCA
GCTTTAGCTG CTATTGGTGG TATTTTTTGG GCCGTTAGTT ATCCTTCTGT TGAACCTAGC
ATGGGAACTC TTATAGGGCT TAAAGCTTTT GGAGCTGCGG TTTTAGGTGG TATTGGTTCG
GTTGCTGGAG CTGTTTTAGG TGGTTTGATT ATAGGATTTA CAGAAGTTGT TGTTGTTGCT
ATTTTTCCTG ATCTTTCTGG TTTTAAAGAT GCTTTTGCGT TTATCTTTTT AGTATTGATT
TTGCTTTTTA AACCAACTGG AATTTTGGGT ATAAATTTTG AAAAAAGTAG GTTTTAA
 
Protein sequence
MDSSLILQQV INGFSLGSMY ALIAIGYTMV YGVLRLINFA HGDIMMVGAY SALFCVTSMN 
VPFLGALSLA MLFAAALGIA IDRVAYKPLR KAPRISLLIT AIGISFLIQN VFNVLFGSTP
KYFPVPSYLE TVINFNNISI SINNILVPIL TFFILLVVLF ILYKSKYGIA IRALAFDIHT
VNLMGIDANR IIAIVFALGS ALAAIGGIFW AVSYPSVEPS MGTLIGLKAF GAAVLGGIGS
VAGAVLGGLI IGFTEVVVVA IFPDLSGFKD AFAFIFLVLI LLFKPTGILG INFEKSRF