| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1082 |
|---|
| Symbol | ppi |
|---|
| ID | 7410816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | + |
|---|
| Start bp | 1038639 |
|---|
| End bp | 1039121 |
|---|
| Gene Length | 483 bp |
|---|
| Protein Length | 160 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643718208 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_002575655 |
|---|
| Protein GI | 222824081 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 46 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAAAA AAATCGACAC AAAAGATGCA AAAAAATATA ATTTTGCTAT CATTAGTACC
GAAAAAGGTG ATATGAAATT AGAATTATTT CCTGATGAAG CACCACAAAC TGTGTGTAAT
TTTGCCAACT TAGCCAATGA TGGTTTTTAT GATGAACTTG TTTTTCACCG CGTGATTCCA
AATTTTGTGA TACAAGGTGG TTGTCCTTAT GGTATAGGCT CAGGTGGGCC TGGCTATGAG
ATAGAATGTG AATGCGATGG TCAAAAACAC AAACATTTAA GAGGTAGCTT GTCTATGGCT
CACGCTGGTA GAGATACAGG TGGATCGCAA TTTTTCGTTT GTCACAGCCC ACAGCCTCAT
TTAGATGGAG TACATACTAT CTTTGGGCAA ATTAACCCTG AAGATAAAGA AAGCTTGGAA
GTGCTAGATA GCATTAGAGC AGGAGATAAA ATCAAAACTA TCCAAATTTT AGAAAAACTT
TAA
|
|---|
| Protein sequence | MLKKIDTKDA KKYNFAIIST EKGDMKLELF PDEAPQTVCN FANLANDGFY DELVFHRVIP
NFVIQGGCPY GIGSGGPGYE IECECDGQKH KHLRGSLSMA HAGRDTGGSQ FFVCHSPQPH
LDGVHTIFGQ INPEDKESLE VLDSIRAGDK IKTIQILEKL
|
|---|
| |