| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_1072 |
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| Symbol | alaS |
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| ID | 7410806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 1026205 |
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| End bp | 1028742 |
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| Gene Length | 2538 bp |
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| Protein Length | 845 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 643718198 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002575645 |
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| Protein GI | 222824071 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATAA GAAAAGAATA TTTAGAATTT TTTAAATCAA AAGGGCATGA AATCACTCCT
TCAAGCCCTT TAGTTCCTGA TGATGCGACT TTACTTTTTA CTAATGCAGG CATGGTGCCT
TTTAAAAATA TATTTACCGG AGAAATTCCT CGCCCAAATC CTCCACGCAA AACAAGTTGT
CAAACCTGTA TAAGAGCTGG TGGGAAACAT AATGATTTAG ATAATGTAGG CTATACTGCA
AGACATCATA CTTTTTTTGA AATGCTTGGA AATTTTAGTT TTGGGGATTA TTTTAAAGAA
CAAGCTATTG CTTATGCTTG GGAATTTGTA ACTGAAATTT TAAAACTTCC CAAAGAAAGA
TTATATGTAA CTGTGCATGA AAGTGATGAT GAAGCATATA ATTTATGGCA AAAGCACATA
GAAAAAGAAA GAATTTATAA ATTTGGCGAT AAAGATAATT TTTGGCAAAT GGGAGATACT
GGACCTTGCG GGCCTTGTAG TGAAATTTTT TATGATCAAG GTGCTGAGCA TTTTAATTCT
AGTGAAGATT ATATGGGTGG AGATGGAGAT AGGTTCTTAG AAATTTGGAA TCTAGTTTTC
ATGCAGTATG AAAGAAGCGC TGATGGCACA CTTACTCCGC TGCCAAAACC AAGTATTGAT
ACAGGCATGG GGCTTGAAAG AGTTAGCGCT ATAAAAGAAG GAAAATTTAG CAATTTTGAT
AGTTCTTTAT TTATGCCTAT TATTGAGAGT ATTGCTAAGC TTTGTGGTAA AACTTATATT
TATGAAAGTG GAGCTAGCTA TAGAGTAATC GCTGATCATA TTAGATCAAG TGTATTTTTA
CTTGCCCAAG GAGTTGGCTT TGATAAAGAA GGTAGAGGTT ATGTTTTAAG AAGAATTATG
CGCCGTGCCT TAAGACATGG ATATTTACTA GGTCTTAAAA GAGCTTTTAT GTATGAGCTT
GTAGATGTAG TGTGTGAGTT AATGGGTGGG CATTATACTT ACTTAAATGA AAAAAAAGAA
TTTATTAAAG AACAGATTAA ACTAGAAGAA GAAAGATTTT TAAGCACTAT TGAAAATGGT
ATTGAAATTT TCAATGAAGA GCTTAAAAAA ACTAAAGATA TTTTTAGCGG TGAAGTAGCT
TTTAAACTTT ATGATACCTA TGGTTTTCCA CTTGATTTAA CCCAAGACAT GTTAAGAGAA
AAAAATCTTA GCGTAGATGA GGCTAAATTT AATGAGCTTA TGCAAGAACA AAAAGATAGA
GCTAAGGCTT CTTGGAAAGG AAGCGGGGAT AAAGCAGTTA GCGGGGACTT TAAAGTTTTA
TTAGAAAAAT TTGGCAAAAA TACTTTTAGT GGCTATGAAA ATTATGAAGA AAAAACTAAA
ATCATAGCTA TTTTAGATGA AAATTTTAAA ATCATAACCG AAGCTAAGGC AGGAGATATA
GCATGGCTAA TGCTTGAAAA AACTCCATTT TATGCAACAA GCGGAGGGCA AAGCGCTGAT
ATAGGTTTTA TCAATGAAAA TGAGGTTTTA GATACACAAA AATTCTTTGA TATTAATCTT
AGTCAAGTGA AATTAAAACA AAATCTTAAA ACAAATGATG AAGTGTTAGC TTGCATAGAT
ACTAAAAAAA GAGAACAAAT CGCAAGACAT CACAGCGCGA CACATTTATT ACACCATGCT
TTAAGAGAAA TTCTTGGCTC ACACATTAGC CAAGCAGGTT CTTTGGTAGA ACATAATAAA
TTAAGATTTG ATTTTACTCA TCCAAAAGCC CTAAATAAAG AAGAACTAAA ACAAATAGAA
GCTTTAGTAA ATACTTACAT CATGCAAGCA AATGAAGCTA AAGTTGAAAT TTTATCTTTA
AATGAAGCTA AAAAAAGTGG CGCCATAGCT TTATTTAGTG AAAAATATCA AGAAAAAGTA
AGAGTTTTAA CCCTAGGAGC TAGTAAAGAG TTTTGCGGTG GCACCCATGT GAAAAATAGC
TCTGAAATAG GAAGTTTTTA TATTGTCAAA GAAAGCGGGG TTAGCGCTGG AGTTAGAAGG
ATAGAAGCAG TAGTAAGCAA AGCTGCACTT GATTATGTTA ATGAAAATTT AAAAGAGCTA
AACCAAGCCA AAGAAGAGTT AAAAATTCAT GATATTTTAA GCTATGTAGC AAAATTAAAA
AATGAAATAG TTAGTTTAAA AAATGAATTA AAAAATTCAA GCAAAACAGA GTTAAGCTCT
AAAGAACTAA ATGGTATTCA ATATTGTGTG CAAAAAATAG ATAGCGGCGA TATAAAAACC
ATGATAGATG AGTTTAAAAA CAAATTTAAC AAAGTTGTAA TTTTACTTTT ACAAGAAAAA
GAAGGTAAAA TCATCATAGC AGCAGGTGTT AAAGATGCTT CGTTAAAAGC CGGTGCTTTG
GTAAAAGAAA TTGCACAAAT GCTTGGTGGA AACGGTGGTG GTAGGGATGA TTTTGCAACA
GCTGGCGGTA AAGATACAAG CAAAATAGAA CAAGCGCTTG ATCATGCTAG AAAAATCATA
GAAGAAAGTC TTGCTTAA
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| Protein sequence | MDIRKEYLEF FKSKGHEITP SSPLVPDDAT LLFTNAGMVP FKNIFTGEIP RPNPPRKTSC
QTCIRAGGKH NDLDNVGYTA RHHTFFEMLG NFSFGDYFKE QAIAYAWEFV TEILKLPKER
LYVTVHESDD EAYNLWQKHI EKERIYKFGD KDNFWQMGDT GPCGPCSEIF YDQGAEHFNS
SEDYMGGDGD RFLEIWNLVF MQYERSADGT LTPLPKPSID TGMGLERVSA IKEGKFSNFD
SSLFMPIIES IAKLCGKTYI YESGASYRVI ADHIRSSVFL LAQGVGFDKE GRGYVLRRIM
RRALRHGYLL GLKRAFMYEL VDVVCELMGG HYTYLNEKKE FIKEQIKLEE ERFLSTIENG
IEIFNEELKK TKDIFSGEVA FKLYDTYGFP LDLTQDMLRE KNLSVDEAKF NELMQEQKDR
AKASWKGSGD KAVSGDFKVL LEKFGKNTFS GYENYEEKTK IIAILDENFK IITEAKAGDI
AWLMLEKTPF YATSGGQSAD IGFINENEVL DTQKFFDINL SQVKLKQNLK TNDEVLACID
TKKREQIARH HSATHLLHHA LREILGSHIS QAGSLVEHNK LRFDFTHPKA LNKEELKQIE
ALVNTYIMQA NEAKVEILSL NEAKKSGAIA LFSEKYQEKV RVLTLGASKE FCGGTHVKNS
SEIGSFYIVK ESGVSAGVRR IEAVVSKAAL DYVNENLKEL NQAKEELKIH DILSYVAKLK
NEIVSLKNEL KNSSKTELSS KELNGIQYCV QKIDSGDIKT MIDEFKNKFN KVVILLLQEK
EGKIIIAAGV KDASLKAGAL VKEIAQMLGG NGGGRDDFAT AGGKDTSKIE QALDHARKII
EESLA
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