Gene Cla_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_1038 
Symbol 
ID7410772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand- 
Start bp991760 
End bp992440 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content23% 
IMG OID643718164 
ProductHhH-GPD family protein 
Protein accessionYP_002575611 
Protein GI222824037 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value0.444398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGGTT ATGAAATTTT TAAAGCTTTA GTTAATGCAA ATACTGACTA TAAAGATTTT 
GAGTGGTTAG AAAATAATAC TTTAAGTGAA TTTGAAATTT TAATTTCTGT GGTTTTAACT 
CAAAATACAA ACTGGAAAAA TGTATTAAAA GCTTTGATAA ATTTAAAACA AGCAAATATT 
ACTAAGATAG AAGATTTATT AAATTTAAAT ACTCAAGATT TAGCACTTTT AATAAAACCA 
AGTGGATTTT ATAATACTAA GGCAAAATAT ATTAAAAATT TTACTCAAAA ATATTTTCAA 
GATTTTAATT CTTTTGAGTT TTTTAAAGAA GAAGTAGATA GAGAATGGCT TTTAGGTGTT 
AAAGGTTTAG GTCAAGAAAG TGCAGATGGA ATTTTAAATT ATATATGTAA AAAAGAAGTT 
TTAGTAGTTG ATTCTTATAG TGCAAAAATA GCTAATTATT TAGGTTATGA GTGTCAAAGC 
TATGATGAGC TAGCTGAATT TTTTAAAAAA GATATAGCCA AAAATCAAAA CGAATTAAAT 
GTTTTATTAA AAAAAGAATG CAAATTATAT GAGCTTTATC AAATTTTTCA TGCTTTGATT 
GTTTCTTTTT GTAAAATGCA TTTTCAAGGA AAAAAACTTT CAGCAGATGG TGTGCTTATT 
TTAGATCCTT TAAAATTTTA A
 
Protein sequence
MSGYEIFKAL VNANTDYKDF EWLENNTLSE FEILISVVLT QNTNWKNVLK ALINLKQANI 
TKIEDLLNLN TQDLALLIKP SGFYNTKAKY IKNFTQKYFQ DFNSFEFFKE EVDREWLLGV 
KGLGQESADG ILNYICKKEV LVVDSYSAKI ANYLGYECQS YDELAEFFKK DIAKNQNELN 
VLLKKECKLY ELYQIFHALI VSFCKMHFQG KKLSADGVLI LDPLKF