Gene Cla_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0990 
SymbolaroG 
ID7410725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp947315 
End bp948655 
Gene Length1341 bp 
Protein Length446 aa 
Translation table11 
GC content33% 
IMG OID643718117 
Product3-deoxy-D-arabinoheptulosonate 7-phosphate synthase (DAHP synthetase) 
Protein accessionYP_002575564 
Protein GI222823990 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3200] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR01358] 3-deoxy-7-phosphoheptulonate synthase, class II 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.624388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATGGA CTAAAGATTC TTGGAAAAAT TATAAAATTC AACAACAACC ACAATATCCT 
GATGAAAATG AATTACAAGA TGTTGTTAAA AAATTAGAAA AATTACCACC ACTTGTTTTT
GCAGGTGAGG TAGATAAGTT AAAAAAATCC CTTGCTAATG TTGTAAATTC TCAAGCATTT
TTACTCCAAG GAGGAGATTG TGCAGAGAGT TTTGTAAATT TTGGCGCTGA TAATATAAGA
GATATGTTTA AAGTCATGCT TCAAATGGCC ATAGTGCTTA CTTTTGCAGG ATCTTGCCCC
ATTGTTAAAG TAGGGCGCGT TGCAGGGCAA TTTGCAAAGC CAAGAAGTAA TGATTTTGAA
GAAGTAGATG GAGTAAAGCT TCCAAGTTAT CGTGGGGATA TTATTAATGG TTTTGAATTT
AATGAAAAAT CAAGAATAGC TGATCCTAAA AGAATACTAG AAGCATATTA TCAAAGTGCT
ACAACTTTAA ATTTATTAAG AGCTTTTTCA AGAGGCGGTT TAGCAGATTT AAGAGTAGTG
CATAAGTGGA ATTTGGGTTT TTTAAAAAAG GTAGAGCTTG GGAGAAAATA TGATGAACTT
AGTGAAAAAA TCACTCAAGC TTTAGCTTTT ATGCAAGCTT GTGGCATCAC CGATACTCCA
AATCTTTCTC AAACAGCCTT TTATACTTCT CATGAAGCCT TGCTTTTGCC TTATGAAGAA
GCTTTAACTA GAGTAGATAG TTTAAGTGGG GAAATTTATG ATTGTTCAGC ACATATGCTT
TGGATAGGTG AGCGTACTAG AAAAGCAGAT GAAGCACATG TGCATTTTTT AAGTGGAGTG
AAAAATCCAC TTGGTGTTAA GCTTAGTGCT AATTATGATT TAGATGAGAT TAAAAAGTTA
GTAAATATTT TAAATCCACA TAATGAAGCA GGAAGATTAA ATTTCATCAT TCGTATGGGA
TGTGATAAGA TAGAAAATGC CTTGCCAAAA TTATTTAAAG AGTTAAAACA AGAAGGATTT
AATATACTTT ATAGCATAGA TCCTATGCAT GCAAATACGG TTAAATCGGG TAATTTCAAA
ACAAGAGAAT TTGATAAAAT CATTCAAGAA GTGCGTGCAT TTTTTGAAAT AGCTATGAGT
GAGGGAGTAT ATCCTGGTGG GGTACATCTA GAGATGACAG GGCAAAATGT AACTGAATGT
GTGGGAGGCT CTTTAAATAT CACTCAAGAA GAACTTTCTA AACGCTATGA AACACAATGT
GATCCAAGAT TAAATGCTGA TCAAGCTTTA GAATTAGCAT TTATCATAGC AGACTTAGTT
AAAAAGGCAA GAAGATGTTG A
 
Protein sequence
MKWTKDSWKN YKIQQQPQYP DENELQDVVK KLEKLPPLVF AGEVDKLKKS LANVVNSQAF 
LLQGGDCAES FVNFGADNIR DMFKVMLQMA IVLTFAGSCP IVKVGRVAGQ FAKPRSNDFE
EVDGVKLPSY RGDIINGFEF NEKSRIADPK RILEAYYQSA TTLNLLRAFS RGGLADLRVV
HKWNLGFLKK VELGRKYDEL SEKITQALAF MQACGITDTP NLSQTAFYTS HEALLLPYEE
ALTRVDSLSG EIYDCSAHML WIGERTRKAD EAHVHFLSGV KNPLGVKLSA NYDLDEIKKL
VNILNPHNEA GRLNFIIRMG CDKIENALPK LFKELKQEGF NILYSIDPMH ANTVKSGNFK
TREFDKIIQE VRAFFEIAMS EGVYPGGVHL EMTGQNVTEC VGGSLNITQE ELSKRYETQC
DPRLNADQAL ELAFIIADLV KKARRC