Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0792 |
Symbol | hypF |
ID | 7410126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | - |
Start bp | 750625 |
End bp | 752823 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643717922 |
Product | transcriptional regulatory protein HypF |
Protein accession | YP_002575370 |
Protein GI | 222823796 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0531432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCACT TTGGATATGA AATTCATATT AAAGGGCTAG TGCAAGGCGT TGGCTTTCGC CCTTTTGTTT TTAATATAGC TAAAGAGCTT AATTTAAAAG GTGAGGTTTA TAATAATAGC TTAGGTGTTG TTATAATACT TGAGTGTAGC AATGATGAAT TAGAAATTTT TAAAGAAAAA CTTTTTGCTA ATTTACCACC TTTAGCTAGG ATAGATGATT TTAATTTTTC TTATAAAAAA CTTCAAAAAA CTTATAATGA ATTTAGCATA AGTACTTCAC AAGATAGTGA AAAATTTAGC CCGATTTTAA GCGATTTTGC TCTTTGTGAG GATTGCTATA ATGAATTTTA TGATGAGAAA AATCCGCGTT TTAAATACCC TTTCATTACT TGTACAAATT GCGGGCCAAG ATTTTCTATT ATAAAAAAAC TTCCATATGA TAGAGTTAAT ACGACTATGA ATGAGTTTAA AATGTGTTCT TTTTGTCAAA GTGAGTATGA TGATCCTACT AATCGTCGAT TTCATGCCCA GCCACTTTCA TGCCCAAAAT GTAAAATTAC TATTTTTTTA AAAGATAAAA ATCAAAATAT TTTAGCCAAA GATGAAAAAG CTTTTATCTT GCTTGCAAAG CTTTTAGAAG AAGGTAAAAT CATAGCTTTT AAAGGTATGG GTGGGTTTCA TTTAATTTGT GATAGCACAA ATAAAAATGC TATAAATGAA CTTAGAATAC GCAAAAATCG CCCTAAAAAG CCTTTTGCTA TCATGGTAAA AGATCTTAAA ATGGCTCAAG AATTAGCTTT TATCAATGAA GCTGAGGCAA AACTTTTAAC TTCAAATTTA AAACCCATAG TTATTTTAAA TAGCAAAAAT ATCCATAAAA GCTTAGCGCC AGATACTAAT AAAATAGGTA TTATGTTAGC TTATATGGGA ACGCATTTAA TGCTTTTTGA ACATTTTAAA AAACCTATCA TTGCAACAAG TGCTAATTTA AGCTCACAAA GCATTATTTA TGAAGAAACA AAACTTTTAG AGCAACTTAG CGATGTGTTT GATTTTTATC TTGATTATGA TAGAGCAATA TATAACTCAA GCGATGATAG CATTGCTCAA GTTATTGGTA AAGAGGTAAT GTTTTTAAGG ACTTCAAGAG GTCTTAACCC ACTTTATATC AATACAGCAG GTATTTTTAA TGCAAAAGAA AATATTCTAG CTCTAGGAAG TGAGTTAAAA AACGAATTTG CATGTTTTTT TAAAAATCAA ATTTTTATTT CTCCTTATAT AGGTGATATG AAAAGTTTAG ACATACAAGA GAGATTTTTT AAAATTTTAA CTTTCTTTCA AAACTCTTAT AAGTTAAATT TTGATCAAAT TTTAAGCGAT AAACACCCAC AATTTAACTA TGTAAAAGAA TTTAAAGATT ATAAAAATTT TCGCGTGCAA CACCACTATG CGCATTTATG TGCTTGTTTA TTTGAACATA AAATTTACAA AAATGATGTT TTAGCCTTTG TTTTTGATGG GACAGGTTAT GGAGATGATG GAAAAATTTG GGGTGGGGAG ATTTTTAGAG CAAATTTAAA AAGCTATGAA AGGCTAAATC ATTTTAAAAA TTTCAAACTA ATTAATGCAG ATATTAAAAA CATTGCAAAT TTAGCTTTGG CTTTGATTTT TGATTTTAAT TTAGAAAGCA AAGCTAGCGA GTTTTTAGCT AAATTTTCTC AAGTAAAATT AAACAATCTT AAAAAAATTC ACACTCAAAG CTCTTTATAT ACGAGTTCTC TTGGTAGGAT TATTGATGCT TTTGGCGCTT TTGCTTTTGA TATGCAAAAA CTTGATTATG AAGCACAAAT TGGACTTTTG ATGGAAAAAT ATTATGATAA AAATCTTGAT TATAATTACA AATTTGATAT CTATGAAAAA GAAATTTGCT TTAAAAATGC CTTTTTGCAA GCTTTAGAAG ATAAAGATAA GGTTAAAATT AGCACTGGTT TGCTTAATGG CATTGCAAAT TTAATTATAG AATATTCAAA AGATTTTAAA GAAGAAGTGC TTTTATGTGG CGGGGTATTT CAAAATAAAA CCTTGCTTGA AATTTTAGTT CGAAAAAATT TTGCTTATAA AACTTCCTTA CAATTTCCTT GCAATGACAG CTCTATTGCG CTTGGACAAC TTGTGCATTA TTTATCTTTA AAAACTTAA
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Protein sequence | MSHFGYEIHI KGLVQGVGFR PFVFNIAKEL NLKGEVYNNS LGVVIILECS NDELEIFKEK LFANLPPLAR IDDFNFSYKK LQKTYNEFSI STSQDSEKFS PILSDFALCE DCYNEFYDEK NPRFKYPFIT CTNCGPRFSI IKKLPYDRVN TTMNEFKMCS FCQSEYDDPT NRRFHAQPLS CPKCKITIFL KDKNQNILAK DEKAFILLAK LLEEGKIIAF KGMGGFHLIC DSTNKNAINE LRIRKNRPKK PFAIMVKDLK MAQELAFINE AEAKLLTSNL KPIVILNSKN IHKSLAPDTN KIGIMLAYMG THLMLFEHFK KPIIATSANL SSQSIIYEET KLLEQLSDVF DFYLDYDRAI YNSSDDSIAQ VIGKEVMFLR TSRGLNPLYI NTAGIFNAKE NILALGSELK NEFACFFKNQ IFISPYIGDM KSLDIQERFF KILTFFQNSY KLNFDQILSD KHPQFNYVKE FKDYKNFRVQ HHYAHLCACL FEHKIYKNDV LAFVFDGTGY GDDGKIWGGE IFRANLKSYE RLNHFKNFKL INADIKNIAN LALALIFDFN LESKASEFLA KFSQVKLNNL KKIHTQSSLY TSSLGRIIDA FGAFAFDMQK LDYEAQIGLL MEKYYDKNLD YNYKFDIYEK EICFKNAFLQ ALEDKDKVKI STGLLNGIAN LIIEYSKDFK EEVLLCGGVF QNKTLLEILV RKNFAYKTSL QFPCNDSSIA LGQLVHYLSL KT
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