| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0735 |
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| Symbol | xerD |
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| ID | 7410069 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 702613 |
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| End bp | 703680 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643717866 |
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| Product | integrase/recombinase |
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| Protein accession | YP_002575315 |
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| Protein GI | 222823741 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000138239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATC CTCTAGATTG TGAAGAAAAT TTTGAAAAGT CATTTTTATT TTGGCTTTGT
AGGTATGTTA AATTTAAGCT TAATTCTTTA TCAAATAAGG AATTAAAAGA TCCTCAAGCT
TTAGCTGTAG TAAATTTGGC TTTAAGTAAG GGTGTAAAAA ATATACAAGA GCTTGATGCT
TATGTAAAAA AGGCTAGAAA TGCAGGACTT AGTGGGGTTA ATACTTATTT TAATCCTTTA
AAAAAACTCT ATGAATATTT ACTTTTTTAC AAACTTTATT CATTAAAGCA AATAGATGAA
GAGCTTTTGG TGGAAATTTT AGCAAGCATT AGCGCTTCAT TATCTGATGC TAGTAAGAAA
AATTACCGCA TAGCTGTGAT TAATTTTTTT GCATTTTTAG ACAAACAAAA TGAAGAAGAA
CAAAAAGCTC ATATTTTTGA TATAAATCTC AAAAATTGGG CAGGTATAAG TGGCTCTAGG
GGTGTGAAAT TACCTGAATA TATGAGCGAA GATGAAGTGG GTAAATTTTT AGATGCTATT
GATACAATTG ATTTTAAAAA CAACACTATT CGCAATCGCT TGATTATTAA AATCATCATT
TTTACAGGAA TTCGTGTAAG TGAAGCTATT AATATAAAAT TAAAAGATAT AAGTGAAGAA
AATGATCTTT ATATTATACG CATTAGAGCC AAAGGTAATA AATACCGCGT TGTGATGATA
AAAAAAGAGC TTATAGAACA TCTTTTAAAA GATGTTAGGG TAAATTATCT CTCTTATGAT
GGGCTTTTAT TTGTCAATCG CAATGGTAAA GCCCTAACCC AAGCTTATAT TTCGCGTATA
GTAGAACAAA TTTTATTTAA AGCTGGAATT CGCAAACAAA AAAATGGAGC TCATATGCTA
AGGCACACTT TTGCCACCCT ACTTTATAAA AAGCAAAAGG ATTTAGTTTT AGTTCAAGAA
GCATTGGGTC ATGCAAGCTT AAATACTTCA AGAATTTATA CGCATTTTGA TAATGAAAAA
TTAAAACTAG CAGCAGAAGT AGCTAAAAAA CTTCACGATA AAACTTAA
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| Protein sequence | MKYPLDCEEN FEKSFLFWLC RYVKFKLNSL SNKELKDPQA LAVVNLALSK GVKNIQELDA
YVKKARNAGL SGVNTYFNPL KKLYEYLLFY KLYSLKQIDE ELLVEILASI SASLSDASKK
NYRIAVINFF AFLDKQNEEE QKAHIFDINL KNWAGISGSR GVKLPEYMSE DEVGKFLDAI
DTIDFKNNTI RNRLIIKIII FTGIRVSEAI NIKLKDISEE NDLYIIRIRA KGNKYRVVMI
KKELIEHLLK DVRVNYLSYD GLLFVNRNGK ALTQAYISRI VEQILFKAGI RKQKNGAHML
RHTFATLLYK KQKDLVLVQE ALGHASLNTS RIYTHFDNEK LKLAAEVAKK LHDKT
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