Gene Cla_0682 details

Gene Information

• Locus tag: Cla_0682
• Symbol: rpiB
• ID: 7410016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: -
• Start bp: 653138
• End bp: 653575
• Gene Length: 438 bp
• Protein Length: 145 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643717813
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_002575262
• Protein GI: 222823688
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 53
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAGAG AAAAAATTTA CATAGCAAGC GATCATGCTG GCTTTATTTT AAAACAAGAA 
ATTATCAATT TTTTACAAGA AAAAAATATA AGCTTTGAAG ATTTAGGTCC TTTTAGTAAT 
GATCGTTGTG ATTATCCTGA TTATGCACAT CTACTAAGCT CTAAAATTAA TGAAACCAGT 
TTTGGAATTT TAGTTTGTGG ATCAGGTATT GGTATGAGTA TAGCAGCAAA TCGCCATACA 
AACATACGCT GTGCTTTATG TAATGAACCC TTAAGCGCTA AACTCTCAAG AGAGCATAAC 
GATGCAAATG TTTTAGCCTT AGGATCTAGA CTAACCGGAA TAGATATGGC TTTTGAAATT 
ATAAATAATT TCATCAATAC TTCCTTTAGT GGTGGAAGAC ATTGCGCGCG AATTAGTAAA 
ATAGAGGCAA AACTATGA 

 

Protein sequence

MLREKIYIAS DHAGFILKQE IINFLQEKNI SFEDLGPFSN DRCDYPDYAH LLSSKINETS 
FGILVCGSGI GMSIAANRHT NIRCALCNEP LSAKLSREHN DANVLALGSR LTGIDMAFEI 
INNFINTSFS GGRHCARISK IEAKL