| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0617 |
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| Symbol | spoT |
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| ID | 7410683 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | + |
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| Start bp | 586172 |
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| End bp | 588361 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 643717748 |
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| Product | ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase |
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| Protein accession | YP_002575197 |
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| Protein GI | 222823623 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAACTAG TAAATGATGA GTTGTTATTA GATAAACTTG TTGATGATGT TAAAAATTGT
AAGGATTTAC AAAGAGCAAA AGAAATCCTT TTTATGGTCT TTCCACAATC TGCTGTTTTA
GAAAAAGCAG TAGATTTTTG TATTCAAAAA CACGAAGGAC AATTTCGAAA AAGCGGAGAA
CCATATGCAG TTCATCCTAT ATTAGTGGCT TCTTTTGTGG CATTTTTAAG CCCTGTGCAG
TCTATGATCA TCGCTGCATT ATTACATGAT GTGTTAGAAG ATACAAATTG CAATGAAGAA
GAACTGAGTT TAAATTTTGG AGAAGAAGTT ACTAAATTAG TTCAAGGTTT AACTAAAATA
GTCAGTATTA GAGAAGATCA TCTTACACGC TCTAATTCTA ATGAAAAACT TGCAAAATCT
GCTTTGACTT TTAGAAATAT GCTTTTAGCT GGTGTTGAAG ATGTGAGCGT GCTTGTAATA
AAGCTTTGTG ATAGATTGCA CAATATGCTT ACTTTAAATT TTTTAAGAGA AGATAAACAA
AAAAGAATCA GTGAAGAAAC CTTGGTGGTA TATGCACCTA TAGCTCATAG ACTTGGAATT
TCAAGTATAA AAAATTTACT TGAGGATTTA AGTTTTAAGT TTTTATTGCC TGATGAATAT
GCACAAATTG ATAATTATAT AAATGCAAAA GATCAACAAA TTCAACTTGG ATTTAATGAA
TTTATTTCAA AAATAGAAAT GTTATTTTTG GAAAATGGGT TTAGACAAGG TAGCTTTGTT
ATACACAAAA GAATTAAACA TAATTACTCT ATTTACTTAA AAATGCAAAG AAAAGGTGTG
GGACTTGATG AAGTTTTAGA CCTTTTAGGT GTAAGAATTT TGGTTGAAAA AGTTTATGAT
TGTTATTTGG CTTTAGGAAT TTTACATACA CATTTTAATC CTTTAATTTC AAGATTTAAA
GACTATATAG CTTTGCCAAA ACAAAATGGT TATCAGACCT TACATACAAC ACTTTTTGAT
GCAAAAAATA TCATAGAAGC TCAAATTCGC ACCTTTGATA TGCACAAGAC TGCTGAATTT
GGCGTGGCAG CGCATTGGAA ATATAAAGAA GGAAATATAA CAACACCAAA TTTAGATTGG
CTTGCAGACA TTTCTATGCA TGGTAAAGAA GATGGCAATG CTGTGCAAGA TTGTGATGCT
ATTGAACTTT ATGAATATGC AAAAGATAGT TTATATATAG AAGATATAGC AGTGTATTCT
CCAAAGGGAG AAATTTTCAC CTTGCCGCGT GGGGCTACAG CTTTAGATTT TGCTTATGAA
GTACATACTA AAGTAGGACT TCATGCAAAA ACTGCTTTTG TTAATCGCGT AAGAGTACCA
CTTTTAACTG TGCTTAAAAA TGGAGATATA GTTAGCATTG AAACTTCAGA AGAAGAATTT
TTTAGATGTT CATGGATAGA TAGCGTTAAA ACAGGAAAAG CTAGGGCTAG TATAAGAGAT
TTTTGCAAGC AAAAGAAAAA AGAGTTAAAT AATAAAATTG CTATTAATCT TTTATCTACT
GTTTTTAATA AAGATTCTAA ACTTATAGAA GAATGGCTTG AAAAAGAAAA TTTTAATAAA
AAGCTAAGAC AAATTGCTTT GGATTTTAAT TATTTTAAAG ATGTAATTAT TGCACTAAGA
AAATATATGG GGCAAAATCA AGCAGCTAAA TTTGAACAAA ATGAGCAAAA ATTCGAAAGT
ATAGTGATTG GTTCTAATTA TAAAATAACC ACGATTAATT TTGATTATTG TTGTAGACCT
AAAAGAGGGG ATGAAATCAT TGCTTTTAGA CAATCAACTG GAGCAACAAT ACACCATAAG
CTTTGTGAGC AAGCAATGAA AATGATAGAA GATAACAAAG AAATGGTTTT TGTTTTCTGG
AATGATAGTT CGATAAAAAG TTACAAAATC ATCGTTTCTA TAGAAAATAA AAAAGGCTCT
TTAGCGGATT TTCTAACTAC TTTGGCTAAA ATGCAGATTA ATGTTTTAAG TATTAACTCA
GCTGATTCAG AGCCAGTTGT TGCAAATTAT TTTGAAGTAC AGGTTGAGTT ACCTAGCAAT
ATAGATCTTG AGAATGCAAA AGAAAGATTA AAATCTAGAT ATAAAATTTT AGATTTTACA
TCTTTAAATG ATGCATATAA TAATCACTAA
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| Protein sequence | MKLVNDELLL DKLVDDVKNC KDLQRAKEIL FMVFPQSAVL EKAVDFCIQK HEGQFRKSGE
PYAVHPILVA SFVAFLSPVQ SMIIAALLHD VLEDTNCNEE ELSLNFGEEV TKLVQGLTKI
VSIREDHLTR SNSNEKLAKS ALTFRNMLLA GVEDVSVLVI KLCDRLHNML TLNFLREDKQ
KRISEETLVV YAPIAHRLGI SSIKNLLEDL SFKFLLPDEY AQIDNYINAK DQQIQLGFNE
FISKIEMLFL ENGFRQGSFV IHKRIKHNYS IYLKMQRKGV GLDEVLDLLG VRILVEKVYD
CYLALGILHT HFNPLISRFK DYIALPKQNG YQTLHTTLFD AKNIIEAQIR TFDMHKTAEF
GVAAHWKYKE GNITTPNLDW LADISMHGKE DGNAVQDCDA IELYEYAKDS LYIEDIAVYS
PKGEIFTLPR GATALDFAYE VHTKVGLHAK TAFVNRVRVP LLTVLKNGDI VSIETSEEEF
FRCSWIDSVK TGKARASIRD FCKQKKKELN NKIAINLLST VFNKDSKLIE EWLEKENFNK
KLRQIALDFN YFKDVIIALR KYMGQNQAAK FEQNEQKFES IVIGSNYKIT TINFDYCCRP
KRGDEIIAFR QSTGATIHHK LCEQAMKMIE DNKEMVFVFW NDSSIKSYKI IVSIENKKGS
LADFLTTLAK MQINVLSINS ADSEPVVANY FEVQVELPSN IDLENAKERL KSRYKILDFT
SLNDAYNNH
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