| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0570 |
|---|
| Symbol | |
|---|
| ID | 7411130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter lari RM2100 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012039 |
|---|
| Strand | - |
|---|
| Start bp | 543806 |
|---|
| End bp | 544993 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 26% |
|---|
| IMG OID | 643717701 |
|---|
| Product | peptidase, M48 family |
|---|
| Protein accession | YP_002575155 |
|---|
| Protein GI | 222823581 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0501] Zn-dependent protease with chaperone function |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 0.802538 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTTTAA TAACAATTTT ATGCTTTTAT ACTTTTTTAA TGATTTATAT TTCTTATCAT
CAAATTAATT TTATAAAAAA AGAAAAAGCC AAACAAGCAG TAATTTTAGA TAAAAATGAT
TATGAAAATG CTGCAAATAT CGCTATAGAA AATGAAAAAT ACAAAATCTT TTCAAATATT
TATAATCTAA TCATCAACAT CGTTTGGCTA AATTTTGGCT TTTTATACTT AAAAGAAATT
TTTATAAAAG AAAATTCTAC CTTAGAAAAT ACTTTGTTTT TGCTTTCTTT TTTGTTTATT
TTAAGTATTT TAAATTTACC ACTTAGTTAT TATGAAAGCT TTGTAAAAGA CAAAAAACAT
GGCTTTTCAA ATATGACCTT AACGCTTTTT ATTAAAGATA GTATTAAATC TTTGATTTTA
ATGCTTGTTT TTGGTTTTTT AATCATTTAT TCTTTAGTAT TTTGTTTTGA ATTTTTTGGT
GCTTATTGGT GGGTAGTAGC CTTTGTGTTA AGCTTTGCAA TTATACTTAT TATAAATCTT
ATCTACCCTA CTTTTATCGC GCCAATTTTT AACAAAATGA CAAAATTAGA AGATGAAAAT
TTATTAGCAA AAATAAGCAA TTTAATGCAA AAATGTGGCT TTAGCACCAA TGGTGTTTAT
ATAATTGATG CAAGCAAAAG AGATAAAAGG CTAAATGCTT ATTTTGGGGG ATTATTTAAA
AGCAAAAGAG TGGTTTTATT TGATACGCTT TTAAAAGCAT TAAAAGAAAA TGAACTTTTA
GCTGTTTTAG GTCATGAATT AGGGCATTTT GTGCATAAAG ATATTGTAAA AATGCTTATT
TTAAATGCCA TAATGCTTTT TGCTTTATTT TTTATCTTTG CACATTTACC AAGCTTTTTT
TACGCCCAAA GCCATTTAGA TGGAGTAAAT GCTGGAGTGT TTGCGCTATT ATTGGTATTT
GGCAATGTAT TTGTTTTTTT CATTTCACCT TTAATCAACA AAATGAGTCA AAAAAATGAA
TTTAATGCTG ATTTACACGG AGCAAAACTT AGCTCAAAAG AAGATATGAA AAACGCTCTC
ATAGCCTTAG CAAAAGAAAA CAAAGCTTTT GTTAAAACAA GTAAAATTTA TGCATTTTTT
CATTTAAGCC ATCCTTGCAT TTTTGATAGA ATCAAAGCCT TGCAATGA
|
|---|
| Protein sequence | MTLITILCFY TFLMIYISYH QINFIKKEKA KQAVILDKND YENAANIAIE NEKYKIFSNI
YNLIINIVWL NFGFLYLKEI FIKENSTLEN TLFLLSFLFI LSILNLPLSY YESFVKDKKH
GFSNMTLTLF IKDSIKSLIL MLVFGFLIIY SLVFCFEFFG AYWWVVAFVL SFAIILIINL
IYPTFIAPIF NKMTKLEDEN LLAKISNLMQ KCGFSTNGVY IIDASKRDKR LNAYFGGLFK
SKRVVLFDTL LKALKENELL AVLGHELGHF VHKDIVKMLI LNAIMLFALF FIFAHLPSFF
YAQSHLDGVN AGVFALLLVF GNVFVFFISP LINKMSQKNE FNADLHGAKL SSKEDMKNAL
IALAKENKAF VKTSKIYAFF HLSHPCIFDR IKALQ
|
|---|
| |