| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0550 |
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| Symbol | oxaA |
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| ID | 7411110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 525227 |
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| End bp | 526807 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 643717681 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_002575135 |
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| Protein GI | 222823561 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCAGAAA ATTTATCTCA ACAAAAACGC ATATTAATTG CCGTTGTATT ATCATTTTTA
TTTTTTGTAG TTTATGATTA TTTTTTTATC CCCAAAGCTC CACAAACTGA GCAAAATATC
ACTCAAATAG AACAAAACAA CTCAGCTCCA CAAAGCACTA TAAATGCAAA CACTCAAGCT
CCAAAAACAG AACTTAGCGT TAATCAAAAA GAAGAAATAG CAGTTGTTAA AAGTGAACAT
TTTGAAGCAC ATATTGACTC TTTAGGTAGG ATAGCTAAAT TTTATCTAAG TGATGAAAAA
TACAAAGATG AAAATGGCAA AAGTATTAAT CTAGTAGATA CTTCTTTATC ACCTTTACCA
TTAGAAATAA GATTTAGTGA TACAAAGATC AACCAAGAGG CGTTTAATAC ACCATATACC
ACAAGTCAAA AAACTATCAA TGTAAGTGAT GAAAATACAA CATTAATCCT TACTCAAAAT
TTAAATAATT TGGTAGTAAC TAAAAAAATC ACTTTCCATA AATATGGAAA CTACGATTTA
GAAGTTAATC TAAGCAAAGA TGCAGCTTAT TTTATCACTC CAGGTTATCG TCCAAATATA
GCGGTTGATA GCTATACAGT GCATGGAGTT TTAATCTTAG ACAAAGATGA TAAAATCACA
ATGTTAGAAG ATGGAGATGT AGAAAATGAT GAAAGTTTTT CTAATGTAAC TCTTATGGCA
GCTTCAGATC GCTATTATAG TGCTTTCTTT TATAATTTTG AAAAACCACT CAGCGCTGTA
GTTACTAAAG ATAACCATGA AAATTCTATC GTTTTTGCAA GCGCATCAAA TACTTTTAAA
GCAAGTGGTT ACATTGGCTC AAAAGAACAT GATATTTTAA GAAATATTGA TCCAAGATTA
GACAATGTTG TTGAATATGG TTGGTTTACT TTCATAGCTA AACCTATGTA TGAATTTTTA
GACTTTTTAC ATGGGTATTT AGGAAATTGG GGTTGGGCTA TAGTGATTAT GACCTTAATT
GTGCGTATTA TTCTTTTCCC GCTTACTTAC AAATCAATGA TTTCTATGAA TAAACTCAAA
GATTTAGCTC CAAAAATGAA AGAAATCAGA GAGCGTTATA AAGGTGATCC TCAAAAAATG
AATTTGCATA TGATGGAGCT TTATAAAAAA CATGGTGCAA ATCCTATGAG TGGATGCTTG
CCTATACTTA TACAAATTCC TATCTTTTTT GCAATTTATA GAGTTTTACT AAATGCTATA
GAATTAAAAG CCGCACCTTG GGCTTTTTGG ATCACAGATT TATCTGTAAT GGATCCTTGG
TTTATCTTAC CTATATTTAT GGGTCTAACT ATGTTTATCC AACAACTTAT CACACCAATG
GCTATACAAG ATCCTATGCA AGAAAAGATT ATGAAATTCT TACCATTAAT TTTCACTTTC
TTCTTCTTAA CCTTCCCAGC AGGTTTAACT TTATATTGGT GTGTAAATAA TATATGCTCA
CTTATCCAAC AAGTGATTGT AAATAAACTT TTTAAAAACC ACAAAAAAGA GGAAATAGCT
AAACATGAAC ATAGAAGCTA A
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| Protein sequence | MSENLSQQKR ILIAVVLSFL FFVVYDYFFI PKAPQTEQNI TQIEQNNSAP QSTINANTQA
PKTELSVNQK EEIAVVKSEH FEAHIDSLGR IAKFYLSDEK YKDENGKSIN LVDTSLSPLP
LEIRFSDTKI NQEAFNTPYT TSQKTINVSD ENTTLILTQN LNNLVVTKKI TFHKYGNYDL
EVNLSKDAAY FITPGYRPNI AVDSYTVHGV LILDKDDKIT MLEDGDVEND ESFSNVTLMA
ASDRYYSAFF YNFEKPLSAV VTKDNHENSI VFASASNTFK ASGYIGSKEH DILRNIDPRL
DNVVEYGWFT FIAKPMYEFL DFLHGYLGNW GWAIVIMTLI VRIILFPLTY KSMISMNKLK
DLAPKMKEIR ERYKGDPQKM NLHMMELYKK HGANPMSGCL PILIQIPIFF AIYRVLLNAI
ELKAAPWAFW ITDLSVMDPW FILPIFMGLT MFIQQLITPM AIQDPMQEKI MKFLPLIFTF
FFLTFPAGLT LYWCVNNICS LIQQVIVNKL FKNHKKEEIA KHEHRS
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