Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0469 |
Symbol | |
ID | 7411206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 445000 |
End bp | 447096 |
Gene Length | 2097 bp |
Protein Length | 698 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717600 |
Product | iron-regulated outer membrane virulence protein, TonB receptor CfrA |
Protein accession | YP_002575068 |
Protein GI | 222823494 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.442515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGAAAA AACATTGTTT ATTGTTTTGT GTTGCTAGTT TTTGGGTCTG TAATGCTTTA TCACAAGAAG TTTTATTGGA TAGCTCCATA GTAAGTGCTT CGGGTTTTTC TCAAGATATC AAAGAAGCCC CTGCTACTAT AAATGTGATT AGCAAAAAAG ATTTAGAAAG TAAGCCTTAT AGAGATGTTG CCGAAGCTAT TGCTGATATT CCTGGTGTGG ATTTATTTGC TAGCAAGGGA AAAACTGGAT CTTATAATAT CACCATGAGA GGTATTACTG GATATACTTT AATTTTAATC GATGGGCGCC GTCAAGGGAT AGGTGGAGAA GTAGGGCCTA ATGGTTTTAA TGAAATTTCA AATTCATTTT TACCTCCAAT TTCTAGCATA GAAAGAATAG AAGTAATCAA AGGGCCAATG AGTACTTTAT ATGGTTCTGA AGCTTTAGGT GGTGTTGTAA ATATCATTAC AAAAAAAGTA AGCGATAAAT GGGAAACATC AGTTAGTTTA GATGGTATTT TTAATGCACA TAAAGAATGG GGTAATACTT ATGGTACAAG TATATATTCA AGTGGTCCAT TGATAAATGA TCGTTTGGGA CTTACTTTGC GTTTTAGAGA ATTTTATAGG GATCAATCTA ATGTTGAATT TAGCAATGGG AGCGGTCAAA GAGTACAAGG TGATCAGGCT CAAAGTCCTA CAAAAGCAAA TAATTTTAAT TTAGGAACTC GGTTAAATTA TTTAGTAGAT GATTATAATA CCTTGATATT TGATATTGAT TTTTCAAGAA ATCATTATGA CAATAAAAAA GAGCAACTAG GAACGCTGAC TAAACCATCT GATGATACTG GTGCTTTGAT AGGTGGTTAT ACAGACACTA TGCAAGTGGA TAAGTTGGTA ACTTATCTAA GTCATGAGGG TGTATATGAA AACTTTTTGA TTACTTCTAC CTTGCAGTAT AACCGTGTAA GTAATGATGG ACGCGAGGTA GTTGGCCAAG TAAATCAGCC ATTTTTAGGA CACAATAGAG ATATAGTTGC TGAAGATATT ATTGTAGATA CAAAATCAGT TATTCCCTTA GGTCAAAGTC ATATTTTAAG CGTAGGTAGT GAATACAGAC TTGAAAAAAT GCAAGATAAA ATCGCTAATC CTACGAATTT TGATCAGTAT TTATTAGCTC TTTTTGCAGA AGATGAGTAT AGTATAAGAG ATGATTTAAG ATTTACTTTT GGTGCAAGAT ATAATCATCA TGAAATTTTT GGAAATAATA TTTCTCCAAG AGCTTATTTA GTTTATAATC CTACTAGCGA GCTTACTTTA AAGGGTGGTG TTTCAACGGG TTTTAGAACT CCATATGCTA ATAGATTGAT AGCGGGGGCT TATAATTATA GTGGACAGGG TAAATATCCT ATGTATGGAA ATCCAAATTT AAAAGAAGAA ACTTCACTTA ACTATGAACT AGCTGCTGTT TATAATAATG ATTTGTTTTA TATTTCAGCC ACTGGGTTTT TGACAAATTT TAAAGATAAA ATTTCTAGTC AAAAATTTAG CAAAAATAGT ATGATTTCGA GTATTGGAAA ATGTGAAGCT GAATCTTGTT ATCAAGCGAT TAATCATGGT AAGGTTGAAT ATAAGGGTAT AGAGCTTGGA GCGGGGATTA CTCCTATAGA TCATTTAAAT TTAGATTTAG CTTATACTTA TCTTGATAGT GAAGTAAAAG ATGCACAAGA TAAGGCTGTG ATAGGAAAGC CAGAGGAAGA TAGTTTAAAA CACAACATCA TGCTAAAAGC AAGTTATAAT ATCTTTAATA AATTTACTCC ATGGGTAAAA GGCGAGTGGC AAGTAGATCG TTATATGGGC GATACAAATA TTAATAGAGA ATATTATCAA GATGTCTTTT TAGCTTCTAT GGGTGTGCGT TATGATATCA ATAAAAAGTG GAGTATTAAC GCAGCAATTT ATAATCTTTT TGATAAAAGT TTTACAAATG CTTGGGAATC TTATAAAAAC AAAGATGATA AAGATGTTTG GGTAAACACT TATAACCGTA TAGAAGAAGG AAGAAGAATT TATATTTCAA TCAATGGTAG TTTTTAA
|
Protein sequence | MMKKHCLLFC VASFWVCNAL SQEVLLDSSI VSASGFSQDI KEAPATINVI SKKDLESKPY RDVAEAIADI PGVDLFASKG KTGSYNITMR GITGYTLILI DGRRQGIGGE VGPNGFNEIS NSFLPPISSI ERIEVIKGPM STLYGSEALG GVVNIITKKV SDKWETSVSL DGIFNAHKEW GNTYGTSIYS SGPLINDRLG LTLRFREFYR DQSNVEFSNG SGQRVQGDQA QSPTKANNFN LGTRLNYLVD DYNTLIFDID FSRNHYDNKK EQLGTLTKPS DDTGALIGGY TDTMQVDKLV TYLSHEGVYE NFLITSTLQY NRVSNDGREV VGQVNQPFLG HNRDIVAEDI IVDTKSVIPL GQSHILSVGS EYRLEKMQDK IANPTNFDQY LLALFAEDEY SIRDDLRFTF GARYNHHEIF GNNISPRAYL VYNPTSELTL KGGVSTGFRT PYANRLIAGA YNYSGQGKYP MYGNPNLKEE TSLNYELAAV YNNDLFYISA TGFLTNFKDK ISSQKFSKNS MISSIGKCEA ESCYQAINHG KVEYKGIELG AGITPIDHLN LDLAYTYLDS EVKDAQDKAV IGKPEEDSLK HNIMLKASYN IFNKFTPWVK GEWQVDRYMG DTNINREYYQ DVFLASMGVR YDINKKWSIN AAIYNLFDKS FTNAWESYKN KDDKDVWVNT YNRIEEGRRI YISINGSF
|
| |