Gene Cla_0196 details

Gene Information

• Locus tag: Cla_0196
• Symbol: atpC
• ID: 7410919
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter lari RM2100
• Kingdom: Bacteria
• Replicon accession: NC_012039
• Strand: +
• Start bp: 176285
• End bp: 176677
• Gene Length: 393 bp
• Protein Length: 130 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 643717331
• Product: F0F1 ATP synthase subunit epsilon
• Protein accession: YP_002574810
• Protein GI: 222823237
• COG category: [C] Energy production and conversion
• COG ID: [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)
• TIGRFAM ID: [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria)

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 0.00211971
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGATT TAATATCTTT AGAAATCATT ACACCCCTTG GCATGATTTA TCAAGGGGAT 
GCAAGATTAG TAGTTCTTCC TGGAAGTGAG GGTGAATTTG GTGTTTTAAA AGGACATGCA 
TCTTTAATCT CTTCTTTAAA AGCAGGAATT ATAGATATAG AAAAATCAGA TTCAACTCAT 
GAATTAGTTG CTATTGATTC AGGTCATGCA AAAGTTTCTG AAACTAAAGT GAGTGTTTTA 
GCAAAAGGTG CTGTATGGGT TGGAGGAAAT AGTGATAGCG AAATAGCAAA AAGATTAGAA 
GAAGCAAAAG ATTTAATTAA ATCTATGAGT AGTGATAGTA TTGCACTTGC TTCTACTTTT 
GCTAAAATGG ATAATAATGT AAGGCAAAAA TAG 

 

Protein sequence

MQDLISLEII TPLGMIYQGD ARLVVLPGSE GEFGVLKGHA SLISSLKAGI IDIEKSDSTH 
ELVAIDSGHA KVSETKVSVL AKGAVWVGGN SDSEIAKRLE EAKDLIKSMS SDSIALASTF 
AKMDNNVRQK