Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0119 |
Symbol | |
ID | 7411351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 103698 |
End bp | 104525 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 643717255 |
Product | putative ABC transporter, periplasmic substrate-binding protein |
Protein accession | YP_002574736 |
Protein GI | 222823163 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA GGGCAAATTA TATTTTGATT GGAATTTTTG TTAGTATATT ATTTTTTATT AGCTTGTTTT TTATAGTGTG GTATGGGAAT TTAAAAGATG AAAAAACTTT TAAATATTAT GAGATTTTTA TGGAAGAATC AGTTGCAGGA CTTAGCGTTA AAGCTCCGGT TAAATTTTTA GGAGTGGATG TTGGGAGTGT TGAAAATATC AGCATAGATA GTTCAAGCAA TCAACTAAGA GTGAAAATCT TAGTCAAGCT TGATTCTAAT CTAGTGGTTA AAACAGATAC TTATGCAAGC TTGCAAATTC AAGGTATAAC AGGATTTAAG TTTATTCAGC TTGCTGGGGG TAGCGATGAA GCTAGTGTAT TAAAAGCAGA TGGTGATGTT TATCCTATTA TAAAATCAAA AGAAAGTTTT TTTGCAAGTC TTGATAAACA AACTACAAAT ATCATAGAAT TAATTTCTAG CTCTAAAGAA AAATTAGATA AGCTCTTTAG TGATAAAAAT TTAAACAATA TAGAGCGTAT TTTACAAAAT ACATCCGAGT TTTCTGCGCA TTTAAATACC AAGGCGCCAG TAATTTTAGA AAATTTAAAT AAAACAAGTT CTAAACTTGG TAAAAGTTCA GATGATTTTT CAAATTTTTT AAATAATGCT AATGGCCAAC TTAACGAGCT TAATAAAAGC AGGATACTTT TAAATGAAAA TTTAGATATT TTAAGAGTTT TGTTTTTAGA TTTTACGCAA TTATTAAAAA AATTAAAGCA AAATCCTTCA GATGTAATTT ATAAAGATAA AGCTATTCAG TATGCTCCAG GAGAATAA
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Protein sequence | MENRANYILI GIFVSILFFI SLFFIVWYGN LKDEKTFKYY EIFMEESVAG LSVKAPVKFL GVDVGSVENI SIDSSSNQLR VKILVKLDSN LVVKTDTYAS LQIQGITGFK FIQLAGGSDE ASVLKADGDV YPIIKSKESF FASLDKQTTN IIELISSSKE KLDKLFSDKN LNNIERILQN TSEFSAHLNT KAPVILENLN KTSSKLGKSS DDFSNFLNNA NGQLNELNKS RILLNENLDI LRVLFLDFTQ LLKKLKQNPS DVIYKDKAIQ YAPGE
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