Gene Cla_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCla_0107 
SymbolflgE 
ID7411339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter lari RM2100 
KingdomBacteria 
Replicon accessionNC_012039 
Strand
Start bp90993 
End bp93437 
Gene Length2445 bp 
Protein Length814 aa 
Translation table11 
GC content38% 
IMG OID643717243 
Productflagellar hook protein FlgE 
Protein accessionYP_002574724 
Protein GI222823151 
COG category[N] Cell motility 
COG ID[COG1749] Flagellar hook protein FlgE 
TIGRFAM ID[TIGR02489] flagellar hook protein FlgE, epsilon proteobacterial
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000370744 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAGAT CTCTTTGGGC TGGAGTTTCA GGACTTCAAG CACACCAATA CGCAATGGAT 
GTAGAAGGTA ACAACATAGC CAATGTTAAT ACATTTGGTT TTAAATATTC TCGTGCAGAT
TTCTCAACGC TTATGAGTCA AACTTCTAAG ATAGCTACAG CTCCAGATGG CAATCTAGGT
GGTAAAAATC CTATGCAAGT TGGACTTGGT GCAGGTGTGA ATTCTACTAC TAGAATTCAC
TCTCAAGGTA ATATCCAAAC TACAGATAAA AACACCGATA TGGCGATCAA TGGTGATGGA
TTTTTCATCG TTTCAAATGA TGGTGGTACC ACTCAGTTTT TCACCCGTGC AGGGGACTTT
AAAACAGACG CAGTAGGAAA TTTCGTAGAT AATAACGGTT ACACCGTTCA AGGCTGGAAT
TATAATCAAG AAACAGGGCA AATCGACTCT TCTAAATCAG TAACAGATAT AGTCATCCCA
CCTGGTATGA GTATGCCTGC TAGACCAAGT TCTTCAGTAA GTCTTACAGC AAATTTAGAT
AGTGGTAATA CTCTAGGCAC AAATGCTTCT GCTAAAAGAC CTATCTATGC ACTTGATTCT
TTACATGGTG GTAGAAAAGA TACAGGAACA ACCATAGATG AGAATGATAC TGGCCATACA
GAGTTTTATA CTACTTCTAA AAGTGGAGCC CAAGTAACCG AAAAAGGTGT AGACATGGGT
GTGGTGTTTA ACGCTCAAGG TGAGGGTTTA AACCTACGCG ATGGACAAGG TATTTGGGTG
AGTTATGCTG ATGCTAAGCA TACATCAAAT GCAACAATGG CAACAGATTT ACCAACAGAT
CCAGCTCAGT GGACAAATGG TAATCATACT TTTTGGGGTT ATAAAGACGG TGGGGATGCT
GTTTTAGACA TAACTATCAA TGGGGTTCAT ATTAGAGCAG AAGGTGTGGG TAAAGATACT
TTTTTAAATG CGATTAATGC CAAAACATCT GAAACCGGGG TAGTGGCTTC TATAGTGAAT
AATCAATTTG TATTTACTAA TGATAATAGC ACAGGAACCA CAGCAAAATC TAAAAATTTA
AATATTGTAG TAAATCAAGG TAATACTGTT GGGGCTCAAG TTACTGTTGG AAAAGGAGAC
ACACCTGGTG CTAGACTTTC TTTAAATAGA ACAGCTTTTA ACAACAATCC TATGGCTGCT
ATTTTAGGAA CAAATGCCAA TAATATTATG AAAAACAATG TCCAAGTAGT AACTGCTCAT
GAGTATATTT ATAGTAAAAA TGGAGTAGAC ATAGGGCCAA ATCCAAATCC GAATGCAAAT
CCACCTGAAA ATGCAAATAT GCCAACTGCA AATGGTCAAA GAAGATTTCA TACTACAGAA
GATTTAAGAG AGCTTTTGCA AAGAGATGCT AGATGGGGTG TGGATTATGA TGGTGATGGA
TCATTGGAGA ATGTTAATAA TCCTGCAGGT GGAAATAATA TTGGTGAAGA TGCAAACCCT
CTAGTAGAGG TAGTGGTGGA AAGTGATGGT AGATTTAAAA TAACCAATCC TACAGGCGGG
AAAGATATGA CTTTTAAAGT GACAGGTTTT TCAGATGAGG TCAATAAAAT CGCTACAAAC
GATAAATTCA CAGCGATGTT TAGCGCTCTA GATGGAAATT TCAACGCAGG TAATAATGAA
AAATACTCTC AAGATATGTA TCTTTCGGCT CATACTGCTA GTATAGAAAT CTTTGACTCA
TTAGGAACTA GACATGAACT AACTGTGCAA TTTACTAAGC AAAGTAAAAC AGCAGATGGT
GGGGCTGAAT GGTCTATCAT CATCTCAGTG CCTGAACCTG CAGAGATTAA TTTCAGTGGC
GATGGAGCTC CGGGAAATAT AGTAGTAGGA AATTTAAGAT TTGGCAATGA TGGCTCGCTT
CAAAGCTATA CACCAAATGT ATTAAATTTT ACCGGAAATA ACGGCTCAAA ACCTGACCAA
GTAATCAAAC TTGACTTTGG AACAACAGGT GGTTTTGATG GTTTAACAAG CTATGATAAA
GACTCAGCTA CCACTAAACA AGAAACCGAT GGTTACACAG GGGGTAACTT AAAACCAGAT
GCATTAAGAA CTGATGAGAA TGGTTATATC TATGGAGAAT TTACAAATGG TAAAACTCTA
GCTTTAGCTA AAGTAGCTCT AGCGACCTTC CCAAATAATA TGGGTCTTGA AGAAATGGGT
AATAACCTTT ATAAAGCGAC AGCAAACTCA GGAACAGCTA CCATAGGTCA TGCTGGTGAA
GGTGGTAGAG GGGGCTTAAA AGGCTCAGCT ATAGAAATGT CGAATGTGGA TTTAAGTCGT
GCATTAACAG AGCTTATCGT AATCCAAAGG GGTTATCAAG CAAACTCAAA AACGATTACC
ACAAGCGATC AGCTTTTAAA TACTTTGCTT CAATTAAAAC AATAA
 
Protein sequence
MMRSLWAGVS GLQAHQYAMD VEGNNIANVN TFGFKYSRAD FSTLMSQTSK IATAPDGNLG 
GKNPMQVGLG AGVNSTTRIH SQGNIQTTDK NTDMAINGDG FFIVSNDGGT TQFFTRAGDF
KTDAVGNFVD NNGYTVQGWN YNQETGQIDS SKSVTDIVIP PGMSMPARPS SSVSLTANLD
SGNTLGTNAS AKRPIYALDS LHGGRKDTGT TIDENDTGHT EFYTTSKSGA QVTEKGVDMG
VVFNAQGEGL NLRDGQGIWV SYADAKHTSN ATMATDLPTD PAQWTNGNHT FWGYKDGGDA
VLDITINGVH IRAEGVGKDT FLNAINAKTS ETGVVASIVN NQFVFTNDNS TGTTAKSKNL
NIVVNQGNTV GAQVTVGKGD TPGARLSLNR TAFNNNPMAA ILGTNANNIM KNNVQVVTAH
EYIYSKNGVD IGPNPNPNAN PPENANMPTA NGQRRFHTTE DLRELLQRDA RWGVDYDGDG
SLENVNNPAG GNNIGEDANP LVEVVVESDG RFKITNPTGG KDMTFKVTGF SDEVNKIATN
DKFTAMFSAL DGNFNAGNNE KYSQDMYLSA HTASIEIFDS LGTRHELTVQ FTKQSKTADG
GAEWSIIISV PEPAEINFSG DGAPGNIVVG NLRFGNDGSL QSYTPNVLNF TGNNGSKPDQ
VIKLDFGTTG GFDGLTSYDK DSATTKQETD GYTGGNLKPD ALRTDENGYI YGEFTNGKTL
ALAKVALATF PNNMGLEEMG NNLYKATANS GTATIGHAGE GGRGGLKGSA IEMSNVDLSR
ALTELIVIQR GYQANSKTIT TSDQLLNTLL QLKQ