Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0085 |
Symbol | sdaA |
ID | 7411317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 72042 |
End bp | 73409 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 643717221 |
Product | L-serine dehydratase |
Protein accession | YP_002574702 |
Protein GI | 222823129 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 49 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTA ATTTAAGTAT ATTTAAAGTT GGTGTTGGTC CTTCATCTTC TCATACTTTA GGACCAATGC TAGCAGGTAA TATGTTTTGT GAAAAGATTA AAGAGAAAAT CACACAAATT ACAAAAATTC AAATTAGACT TTATGGCTCT TTATCGCTTA CTGGTAAAGG CCATTTAAGT GATAAGGCTA TTATATGGGG CTTGAGTGGT TTAAGAGCAA AAGAACTCAA CGCTGCTTTG CAAGATCGTG TATTTAATAA AATTTTACAA GATAAAATTT TGGTTTTAAA TAGCCAAAAA GAATTAAGTT TTGATTATGA TAAAGATTTG ATTTTTGAAA AAGACTTTTT ACCTTTACAT GAAAATGGGT TAAAAGTAAG CGCTTATGAT GAAAATGGAG AAATCATTGC TGAAGAAATT TATTATTCAG TGGGTGGTGG TTTTGTTATG AGTGAAGCTG AACTTCAAAA ACACAAAGAT GGAGCTTGTG AGCAAAAACA CACTAAATTA GAATTTGATA TTAACAATGC AAGCGATGCT TTAAAAATTT GTGAAGAAAG ATCATGGGAT CTAGCAAAAC TTTCTTATGA ATATGAATTG CAATTTCATA CAAAAGAAGA AATAAGAGCT TATTGTTTGG AAATTTGGGA AGTTATGCAA GAAGTTTATT ATAATGGTAT TCATCCAAGT TCAGATTTTC TTCCTGGAAA TTTACATTTA AAGCGCCGTG CTAAAGGGCT TAATGAGCGT TTGGCTATGA CAAGTGATCC TTTAGGGATT ATTGATTTTA TTTCTTTGTA TGCTATTGCT ATTGCAGAAG AAAATGCAAG TGGGGCTAGA GTAGTAACTG CACCAACTAA TGGAGCTTGT GCTGTTGTGC CTGCTGTAAT GCTTTATCTT AAAAACCACA CTGTTGGTTT TAATGATGAA AAAGCTATCA ACTTCTTGCT TGCTGCGATG TTAATAGGTT CTTTTTATAA GAAAAATGCA AGCATAAGTG GTGCTGAAGC TGGCTGTCAA GCTGAAATTG GCAGTGCAAG TTCTATGGCA GCAGGAGCTA TGGCTACTGT GATGGGTTTT GATGCAAAGA TAGCTTGTAA TGCTGCTGAA ATTGCGATGG AGCACCATTT AGGATTAACT TGTGATCCAG TAAGTGGCCT AGTGCAAATT CCTTGTATAG AAAGAAATGC CTTTGGAGCG ATTAAAGCTA TTTCAGCTGC TAGAATGGCA ATGAGTAGAA AATCAACTCC AAAAGTAAGT CTTGATGAGG TTATAAAAAC TATGTATGAA ACCGGCAAAG ATATGAACTC AAAATACAAA GAAACCTCCT TAGGTGGCTT AGCTACTAAT CTTACAAGTG TATGTTAA
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Protein sequence | MSSNLSIFKV GVGPSSSHTL GPMLAGNMFC EKIKEKITQI TKIQIRLYGS LSLTGKGHLS DKAIIWGLSG LRAKELNAAL QDRVFNKILQ DKILVLNSQK ELSFDYDKDL IFEKDFLPLH ENGLKVSAYD ENGEIIAEEI YYSVGGGFVM SEAELQKHKD GACEQKHTKL EFDINNASDA LKICEERSWD LAKLSYEYEL QFHTKEEIRA YCLEIWEVMQ EVYYNGIHPS SDFLPGNLHL KRRAKGLNER LAMTSDPLGI IDFISLYAIA IAEENASGAR VVTAPTNGAC AVVPAVMLYL KNHTVGFNDE KAINFLLAAM LIGSFYKKNA SISGAEAGCQ AEIGSASSMA AGAMATVMGF DAKIACNAAE IAMEHHLGLT CDPVSGLVQI PCIERNAFGA IKAISAARMA MSRKSTPKVS LDEVIKTMYE TGKDMNSKYK ETSLGGLATN LTSVC
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