Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0084 |
Symbol | sdaC |
ID | 7411316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 70708 |
End bp | 72030 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643717220 |
Product | L-serine transporter |
Protein accession | YP_002574701 |
Protein GI | 222823128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGATAATC TTAAGTGGAA TTCTTTTGAT ACGCGTTGGA TGCTTTCTCT TTTTGGGACT GCAGTTGGTG CGGGGATTTT ATTTTTACCT ATTAAGGCAG GTGTTGGCGG TTTTTGGCCA GTTGTTGTAA TGGCTTTGAT TATTTTTCCT ATGGTATATT TAAGCCATAG GGCTTTAAGT CGCTTTGTGT GCCAAGCAAA TGGTAATGAT AAAGACATTA CTCATGCGGC TGAAGAGTAT TTTGGTAGAA AAGTAAGTAT TTTTATTTCT ATACTTTATT TCTTTGCAAT TTTTCCAATT TGTTTAGCAT ACTGTGTGGG TATAACTAAT ACTTTTGAGA GTTTTATTTA TAATCAATTC TTGCCACTTT TAGATCCAAA TGGTTCTTTT GCAAGTGCAA TTAGTGCTAT GTATCAAACA AGTGTTAATG AGCAAGGAAA AACTATAGCT AATTTACTTC CTTTTTATAG AGCAGTTTTT GCTTTTGTTT TAGTAAGTAT TTTTATGCTT ATTATGCTTT TTAGTGAAGA ATTAATCACC AAAGTATGCG AGTGGCTTGT ATATCCTTTA TGTGCTATTT TATTCTTATT TTCTTTATAT CTTATCCCAC AATGGTCTTT TGAGAGTTTT AGTGCTATTC CTGGTACGAA AGAATTTATC ACTATAGTAT GGTTAACTTT ACCAGTTCTA GTGTTTTCGT TTAACCACTC ACCAGCTATT TCTACTTTTT CTCTAAGTGT AAAAAGAGAA TATCCTGAAA ATTCAGTGCA AAAAGCAAAC CAAATTTTAC TTAGAACTTC TGTAATGTTG CTTGCTTTTG TTATGTTTTT TGTGGTATCT TGTGTGCTTT CTTTAACTCC AACTGAGCTT GCTGAAGCTA GAGCGCAAAA TATACCTGTT CTTTCTTATT TTGCTAATAA GCTTGATAAT CCATTTATTT CTTATGGTGG TCCACTAATC GCATTTTTAG CAATTTCAAG TTCATTTTTT GGACATTATT TTGGTGCTAG AGAAGGCGCT TATGGTATAG TTAGAAAATG TTGTAAATTA GCAGGCAATG AAAATCCTGA TTTGAAAAAA ATTGCAGTTT ATTCTACTTT AGTAATGTAT ATTGTTATGT TAATTACTGC TTATATAAAT CCAAGTATTT TAGGTTTTAT TGAAAGCCTA GGTGGTCCAA TTATTGCTGC AATCTTATTT TTAATGCCTA TGATTGCAAT TTACACTGTC TCTAAAATGA AAAAATTCCA AAACAAAGCT TTGGATGCAT TTGTATTTAT CACAGGTATT TTGACAATTA TTACTGTAAT TTATACTTTT TAA
|
Protein sequence | MDNLKWNSFD TRWMLSLFGT AVGAGILFLP IKAGVGGFWP VVVMALIIFP MVYLSHRALS RFVCQANGND KDITHAAEEY FGRKVSIFIS ILYFFAIFPI CLAYCVGITN TFESFIYNQF LPLLDPNGSF ASAISAMYQT SVNEQGKTIA NLLPFYRAVF AFVLVSIFML IMLFSEELIT KVCEWLVYPL CAILFLFSLY LIPQWSFESF SAIPGTKEFI TIVWLTLPVL VFSFNHSPAI STFSLSVKRE YPENSVQKAN QILLRTSVML LAFVMFFVVS CVLSLTPTEL AEARAQNIPV LSYFANKLDN PFISYGGPLI AFLAISSSFF GHYFGAREGA YGIVRKCCKL AGNENPDLKK IAVYSTLVMY IVMLITAYIN PSILGFIESL GGPIIAAILF LMPMIAIYTV SKMKKFQNKA LDAFVFITGI LTIITVIYTF
|
| |