Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0074 |
Symbol | rplF |
ID | 7410635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 63569 |
End bp | 64105 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643717210 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_002574691 |
Protein GI | 222823118 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 0.54113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACGTA TCGGTAAACA ACCAGTTGCT ATTCCAAGTG GAGTAGAAGT AAAATTAGAA GGTAATTTGC TTAAATTTAA AAAAGGAAAT TTAGCAAAAG AGCTTGATAC AAAAGCGAAT GTTAATGTTG AGATTAAAGA AGGTCAAATT CTTTTTTCTC CTAAAGGTGA AGACAGACAA AGTAGAGCAT ATTGGGGAAC TTATAGAGCT TTAACTCAAA ATATTATTAT AGGTTTAACT GATGGCTTTA GCAAGACTTT AGAAATTAAT GGGGTTGGTT ATAAGGCTGC ATTAAAAGGC AAAGTATTAG AACTTGCTTT AGGCTTTTCT CATCCTATAA ACTATGCTAT ACCAGAAGGT ATTGAGATCA CTGTTGATAA AAATAATATT ATTGTTAAAG GTAGTGATAA ACAAGTTGTA GGTCAAGTTG CTGCTCAAAT TCGTGAATTT AGACCACCTG AGCCTTACAA AGGAAAAGGT GTTAAATATT CTACTGAGCG TATTATACGC AAAGCTGGTA AAACATCTAA AAAGTAA
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Protein sequence | MSRIGKQPVA IPSGVEVKLE GNLLKFKKGN LAKELDTKAN VNVEIKEGQI LFSPKGEDRQ SRAYWGTYRA LTQNIIIGLT DGFSKTLEIN GVGYKAALKG KVLELALGFS HPINYAIPEG IEITVDKNNI IVKGSDKQVV GQVAAQIREF RPPEPYKGKG VKYSTERIIR KAGKTSKK
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