| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0023 |
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| Symbol | |
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| ID | 7410584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 22428 |
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| End bp | 23330 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 643717159 |
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| Product | putative ribosomal pseudouridine synthase |
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| Protein accession | YP_002574642 |
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| Protein GI | 222823069 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.835317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATATA TAAAAAAGAA ACTAGCAAAT AATGGAAAAA AGGCATTTAG ACTACTTATG
GATGAGTTAA AAATTTCTAT GCATGAGGCA CAAAAACTCA TTGATAAAAA AAGACTATTT
TGCAATGGAA ATTTAGTAGA AGAAAAAAAC AAATTTTTAG ATGGCTTAGT GGAATTAATC
GTATATGAAA ATAACCCTAA AGGATTGGAA ATAGTTTTTG AAAATGAAGA TTTTGCCATC
GTAGAAAAGC CAAGTGGAGT GCTAACTCAT CCTAATGGAC GCAATTGTAC TTATAGTCTT
TGTGATGAAA TTTGGCATTT ATGGGGACAA AATGCTTGCG TGGCTCATAG ACTAGATAAA
GAAACGAGTG GGCTTTTACT CATAGCAAAA CACAAAAATG CACAAATTGA ATTAAAAACC
ATGTTTGAAA AAAGATTAGT GCAAAAAAGC TATCTTGCTC TAGTAAAGGG AAAAACCAAA
GAAGAATTTA TAGTAGATAA AAGTATGGAT TTAGCTAAAG ACTATGATGC AGTCAAAACT
AGGATGCATA TTTGTGAAAA TGGCAAAGAA GCTTTAACTC AATTTTACAC TTTAGAATAT
TTTGAAAATT TAGATGTCAG TTTAATTTTA GCTAAACCTC TAACAGGCAG ACAACATCAA
ATAAGACTAC ATTTGTTTCA TGTGAAACAT AAAATTTTAG GTGAACCTTT ATATGGTTTA
GAAAAAACAC AAATAGAGCA AATATTAGAT GGAAAAATGA GTGATATCAA AAGAGCTCAC
ATCACAGGGG CTAAAAGACT GCTTTTACAC TCTTTTAGCT TAGAATTTAT ATATAAAAAT
CAAAAATTTT TGATACAATC TCAAAAAGAT GTAAAAGGTG AATTTTTAAA AAATCTACCT
TAA
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| Protein sequence | MAYIKKKLAN NGKKAFRLLM DELKISMHEA QKLIDKKRLF CNGNLVEEKN KFLDGLVELI
VYENNPKGLE IVFENEDFAI VEKPSGVLTH PNGRNCTYSL CDEIWHLWGQ NACVAHRLDK
ETSGLLLIAK HKNAQIELKT MFEKRLVQKS YLALVKGKTK EEFIVDKSMD LAKDYDAVKT
RMHICENGKE ALTQFYTLEY FENLDVSLIL AKPLTGRQHQ IRLHLFHVKH KILGEPLYGL
EKTQIEQILD GKMSDIKRAH ITGAKRLLLH SFSLEFIYKN QKFLIQSQKD VKGEFLKNLP
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