Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cla_0003 |
Symbol | gyrB |
ID | 7410564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter lari RM2100 |
Kingdom | Bacteria |
Replicon accession | NC_012039 |
Strand | + |
Start bp | 2539 |
End bp | 4857 |
Gene Length | 2319 bp |
Protein Length | 772 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 643717139 |
Product | DNA gyrase subunit B |
Protein accession | YP_002574622 |
Protein GI | 222823049 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAA ATCAAAATTA TAATGCTGGA AATATAAAGG TTTTAAAAGG CTTAGAAGCT GTTAGAAAAC GCCCAGGTAT GTATATAGGA GATACAAACA TAGGTGGGCT TCATCATATG ATTTATGAAG TAGTTGATAA TTCTATAGAT GAAGCTATGG CAGGTTTTTG TGATACTATA AATGTAGAAA TTACCACTGA GGGTTCTTGT ATAGTTAGTG ATAATGGTAG AGGAATTCCT GTTGGAATGC ATCCTACTGA AAATATGCCT ACTTTAACCG TTGTTTTAAC CGTTTTACAC GCAGGTGGTA AATTTGATAA AGATACTTAT AAAGTTAGTG GTGGTTTACA CGGGGTTGGT GTAAGTGTTG TTAATGCTTT ATCAAAAAAA TTAGTTGCTA CAGTGCATAG AGATGGTGAA ATTTATAGAC AAGAATTTTC AGAAGGAAAA GTAACAAGTG ATTTTGAAAC CATAGGAACT AGTAAAAAAA CAGGGACTAT TATAGAATTT TGGCCAGATG ATCAAATATT TGAAATAACT AATTTTGATT ATGAAATTTT AGCAAAAAGA TTTAGAGAAC TTGCATATTT AAACCCAAAA ATAACTATAA ATTTTAAAGA CAATCGCATA GGAAAAGCAG AAAGTTTTCA TTTTGAAGGT GGTATAAGTC AATTTGTAAC AGACTTAAAT AAAAAACAAG CTTTAACTAA GGCTATATTT TTTAATGTAG ATGAAGAAGA TGTAAATGTA GAAGTTGCTT TACTTTACAA TGATAGTTAT AGTGAAAATT TACTTTCTTT TGTAAACAAT ATTAAAACTC CAGATGGTGG AACTCACGAA GCTGGTTTTA GAATGGGTCT TACAAGAGTA ATAAGTAATT ATATAGAAGC AAATGCTAGT GCTAGAGAAA AAGATTCTAA AATCACAGGT GAAGATGTAA GAGAAGGTTT GATAGCTGTT GTTAGTGTAA AAGTTCCTGA ACCTCAATTT GAAGGACAAA CCAAAGGAAA ATTAGGCTCA AGCTATGTTC GTCCTATAGT TTCTAAGGCT TCTTTTGAAT ATTTAACAAA ATATTTTGAA GAAAATCCTA TAGAAGCAAA AGCTATAATG AATAAAGCTT TAATGGCTGC TCGTGGTAGA GAAGCTGCGA AAAAAGCAAG AGAATTAACA AGAAAAAAAG AAACTTCAAG TGTAGGAACT TTACCTGGAA AATTAGCTGA TTGTCAAAGT AAAGATCCAA GTGAGAGCGA AATTTATTTA GTTGAGGGTG ATAGTGCTGG AGGTTCAGCA AAACAAGGTA GAGAAAGAAC TTTTCAAGCT ATTTTACCTT TAAGAGGAAA AATACTTAAT GTTGAAAAAG CAAGACTTGA TAAAATTTTA AAAAGCGAAC AAATTCAAAA TATGATCACA GCTTTTGGTT GTGGAATAGG AGATGAATTT GATATAGAAA AATTAAGATA TCATAAAATC ATCATCATGA CCGATGCTGA TGTAGATGGT TCTCATATAC AAACTTTGCT TTTAACATTT TTCTTCCGTT TTATGAATGA ACTTGTAGCA AATGGACATA TTTATCTAGC TCAACCACCT TTATACCGCT ATAAAAAAGG ACAAAAAAAA GAAATTTATT TAAAAGATGA AAAAGCTTTA AATGATTATC TAATAGAAAC TGGTATAGAA AGTTCAAATT ATGAAGGCAT AGGCTTAAAT GATTTAAAAG ATTTTTTAAA AATAGTTGCT GCTTATAAAA ATGTTTTAAA AGAATTAGAA AAAAGATTTA ATGTAATTTC AGTGATTAGA TATTTGATAG AAAATCCTGA TTTTATTAAA GCTTCTAATG AAGAATTATT TAAAGTGGTA AAAGAATTTT TAGAAAAACA AAATCACAAT ATCTTAAATT CATATATCAA TGAAAGTGAA ATTCGTCTTT ATGTGCAAAC TGAAAATGGT TTAGAAGAGC TTATAATAAA TGATGATTTA TTTACAAATC CTTTATACGA AGAAGCAAAT TATATTTATC AAAAAATTAA AGATAGGGAT TTGAAATTTG ATAAAGATAT TTTAGAAATT TTAGATGATG TTGAAAAAAA TGCTAAAAAA GGTGCTTATA TACAGCGTTA TAAAGGTCTT GGTGAAATGA ATCCTGATCA ACTTTGGGAA ACTACTATGG ATCCAAATAA TCGTCGTTTA TTAAAAATTA CTATAGAAGA TGCTCAAAGA GCTGATGAAA CATTTAATCT TTTCATGGGA GATGATGTAG AACCACGCCG TGAATATATA CAAGCACATG CTAAAGATGT TAAACATTTG GATGTTTGA
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Protein sequence | MQENQNYNAG NIKVLKGLEA VRKRPGMYIG DTNIGGLHHM IYEVVDNSID EAMAGFCDTI NVEITTEGSC IVSDNGRGIP VGMHPTENMP TLTVVLTVLH AGGKFDKDTY KVSGGLHGVG VSVVNALSKK LVATVHRDGE IYRQEFSEGK VTSDFETIGT SKKTGTIIEF WPDDQIFEIT NFDYEILAKR FRELAYLNPK ITINFKDNRI GKAESFHFEG GISQFVTDLN KKQALTKAIF FNVDEEDVNV EVALLYNDSY SENLLSFVNN IKTPDGGTHE AGFRMGLTRV ISNYIEANAS AREKDSKITG EDVREGLIAV VSVKVPEPQF EGQTKGKLGS SYVRPIVSKA SFEYLTKYFE ENPIEAKAIM NKALMAARGR EAAKKARELT RKKETSSVGT LPGKLADCQS KDPSESEIYL VEGDSAGGSA KQGRERTFQA ILPLRGKILN VEKARLDKIL KSEQIQNMIT AFGCGIGDEF DIEKLRYHKI IIMTDADVDG SHIQTLLLTF FFRFMNELVA NGHIYLAQPP LYRYKKGQKK EIYLKDEKAL NDYLIETGIE SSNYEGIGLN DLKDFLKIVA AYKNVLKELE KRFNVISVIR YLIENPDFIK ASNEELFKVV KEFLEKQNHN ILNSYINESE IRLYVQTENG LEELIINDDL FTNPLYEEAN YIYQKIKDRD LKFDKDILEI LDDVEKNAKK GAYIQRYKGL GEMNPDQLWE TTMDPNNRRL LKITIEDAQR ADETFNLFMG DDVEPRREYI QAHAKDVKHL DV
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