| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_3326 |
|---|
| Symbol | |
|---|
| ID | 9147242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3703752 |
|---|
| End bp | 3705467 |
|---|
| Gene Length | 1716 bp |
|---|
| Protein Length | 571 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003638404 |
|---|
| Protein GI | 296131154 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.742829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCCTA TCCTGGGGGC GTCGCCCGAG CAGGAGGAAG TCGTGACCCA GGCAGCAGTC
CCGGTGCGGA CGCAGGAGGA CGTCACGTCC GCGCTCCTGT CGGCGATCCT CGACATGGCG
GGGGACCTGG ACACCCGCAG CCTGCTGGAA CGGTTCGTCG CGGCCAGCAC CGGCCTCACC
GGGGCGCGCT ACGGCGCCAT CAACATCGTC GACGAGGCCG GCGCGTCGGT CGAGTTCGTG
CAGAGCGGCG TCGAGGAGTC CGTCGTCGCC GCGCTGGGCC ACCCGCCGCA CGCCTGGGGG
GTGCTCGGCG CGATCCCCGA CGAGGGCGTC CTGCGCCTCG AGGACCTCAC GCACCACCCC
GACTTCCGGG GCCTGCCGCC GGGGCACCCG CCGATGGGCT CGTTCCTCGG GGCGGCCGTG
CGCGTGCGCG GCGAGCGGTT CGGCACGCTG TACCTGTCCG AGAAGGCCGG CGGGTTCGAC
GAGGACGACG AGGGCGTCGT GCTGTCCCTG GCCGCCGCCG CCGCCATCGC CGTGCACAAC
TCGCAGTCGT ACGACCTGGA GGTCCGCCGT CGGCGCTGGC TCGCCGCCGC GCAGGAGATC
TCCACGATGC TGCTGGAGGG TGCCGACGCC GAGGACGTCC TCGAGCGGGT CGCCGACGCG
GCCGTGCAGG TCGCCGGCGC GCACGTCGCT GCGATCGTGC TGCCCGGCGC CGACGCCGAG
CTGCTCGTCG AGATCGTCAC ACCCGCGGGC CGCACGATGC TCGGTGCGGA CATGAGCGCG
CACCCGCGGG TCCGCGCGGC GTACGACGAG GGCGCCGGTG CCCTCGTCGC CGACGTGAGC
GCCGACGGTG CGGACGCCTT CACCGGGTAC GGGCCCGGGC TGCTCGCCCC GCTGCACGCC
CACGGGCAGG GGATGGGGGT CCTCACGCTG CTGCGACGCT CCGGTGCCGC GCCGTTCACC
GACGACGACC TGGACCTCGC GCAGTCGTTC GCGCGGCAGG CGGCACTGGC CTTCGTCCTC
GGGGAGGCCG CCCGGCTGCG GGGCACCGCC GCGGTCCGCG ACGAGCGCAC CCGCATCGCC
CGGGACCTGC ACGACCTGGC CATCCAGCAG CTCTTCGCCG CCGGGATGCA GGTCGAGGCG
CTGCGCGCCG ACCCGTCGGG CCCCGTCTCG CCGGAGGTGT CGCAGGCCCT GGAACAGGTC
GTCGCGCACG TCGACGCCGG CATCCGGCAG ATCCGCGTCA TCGTGCGGAC CCTCGACGAC
CCCGGCGCGA CGATCCCGCT CGTCGAGCGG GTCGTCGCCG AGGTCGAGCT CGCCCGCTCG
TCGCTCGGCT TCGCGCCGCA GCTCACCGTG CGGGTCGACG GCCGGCTCGT CGAGGCGATC
GCCGGCGACC GCGTCGAGGC GGGCGGCATC GACGACGTCG TCGCGCCCGG CCGCGCCAAC
AATGTCGTCG CCGTGGTGCG CGAGGGACTG TCGAACGTCG CGCGCCACGC CCGCTCGCAG
GCCGTGTCCG TGCGGCTCGA GGTCACGACC GGGCAGCCGG GCGAGGTCGT CGTCGAGGTC
GAGGACGACG GGGTCGGCGT GCCGCCCGCC CCCGCGCGGG CGTCCGGGAC CCGGAACCTC
GCGCAGCGTG CCGAGGAGTC CGGCGGGTCG TTCGCGCTGC TGCGGCCGCC GTCCGGGCGC
GGGGCGCTGC TGCGGTGGTC CGCACCGCTG GACTGA
|
|---|
| Protein sequence | MTPILGASPE QEEVVTQAAV PVRTQEDVTS ALLSAILDMA GDLDTRSLLE RFVAASTGLT
GARYGAINIV DEAGASVEFV QSGVEESVVA ALGHPPHAWG VLGAIPDEGV LRLEDLTHHP
DFRGLPPGHP PMGSFLGAAV RVRGERFGTL YLSEKAGGFD EDDEGVVLSL AAAAAIAVHN
SQSYDLEVRR RRWLAAAQEI STMLLEGADA EDVLERVADA AVQVAGAHVA AIVLPGADAE
LLVEIVTPAG RTMLGADMSA HPRVRAAYDE GAGALVADVS ADGADAFTGY GPGLLAPLHA
HGQGMGVLTL LRRSGAAPFT DDDLDLAQSF ARQAALAFVL GEAARLRGTA AVRDERTRIA
RDLHDLAIQQ LFAAGMQVEA LRADPSGPVS PEVSQALEQV VAHVDAGIRQ IRVIVRTLDD
PGATIPLVER VVAEVELARS SLGFAPQLTV RVDGRLVEAI AGDRVEAGGI DDVVAPGRAN
NVVAVVREGL SNVARHARSQ AVSVRLEVTT GQPGEVVVEV EDDGVGVPPA PARASGTRNL
AQRAEESGGS FALLRPPSGR GALLRWSAPL D
|
|---|
| |