Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_2825 |
Symbol | |
ID | 9146733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | + |
Start bp | 3142315 |
End bp | 3144270 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003637909 |
Protein GI | 296130659 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0147323 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCCTGG TCGGGGTCGC GCTGGTCCTG GTGACGTCGG CGCAGATGCG TGGTCAGGCG GTGCGCGACG GGACCGCCGC GGCGTCGCGC ATGGCGGCGT TCGCCGCGCG CGCCGTGCCC ACCGCGTCGT TCGTGACCGG CGTGCTCTCC GCCGACGAGC GCGACGCGGC GGCCGCCGCG GTCGCGGGCT TCGGTGACGA GCTCGTCGAG CTGCGGCTGT GGAGCACCGA CGGTCGGCTC ATGTACTCGT CCGACGGCGC GACCACCGGC CTGCCGGCCG CTGACCGCCT GGGGCGGGTC ATGGCGTCCG GCCAGCCCGA CGCGGTCGTC CAGCCGGACG TGCGGGCGGG GGGCGCAGCA GCCGACGAGC GCACCGTCAT CGACGTCTAC GTGCCGGTGC GCGTGTCCGA CACCGCGGAC CCCGGCGACC TCGCCGACGG CGCACCCGAC GAGGCGGCCG GTGCCGTCGA GGTCATGCTC GACCACACAG GCACCCAGCA GACCCTGCGG ACCACGACGC GCACGGTGAC GCTCGTGGTC GTCGGCAGCC TGGTCGTGCT CTGGCTGCTG CTGTTCCAGA TCGTGCACTC GACGTCGCGG CGGTTGCGCT CGACCGCTCT GGAGAACGCG CGCCTCGCAC TGCTCGACTC GCTCACCGGG CTGCCGAACC GCCGCCTGCT CTCCGACCAG ATGCAGCGCG CGATCGACCG CGCCGCCGAC GACCCCGAGG CTCGGGTCGG GCTGATCCTG CTCGACATCG ACCGGTTCAA GGACATCAAC GACACCCTCG GCCACGACCA CGGCGACGAG CTGCTGCAGC AGGTCGCCGA GCGGCTGCGG CACGCGCTGC GCGACGACGA CGTGGTCGCA CGCCTCGGCG GCGACGAGTT CGCGATCCTG CTGCCGGACG TGCGCACGGT CGCCAACGCC GAGCGTCTCG CGATGCGCGT GCGCGGCCTT TTCACGCGTC CGTTCGAGCT GAGCGACATC GCGCTGCACG TCGAGACGTC GATCGGCGTC GCGTGCCTGC CGGACCACGC GGCGGACGCG TCGGCGCTGA TGCGCACCGC CGACATCGCC ATGTACGCGG CCAAGCACCA CCGGACGGGC GTCAGCGTGT ACTCCCCCAC CGCGGACGAC TCCTCGCCCG CACGTCTGGT GCTGCTGGGC GAGCTGCACC AGGCGCTGGA GTCGCGGGGC GACCCCGGCG CCGAGCCGCA GCTCGAGCTG CACTACCAGC CGAAGATCGA GCTCGCGACG CAGCGCACGG TCGGGCTGGA GGCGCTGATC CGCTGGCGGC ACCCCGCGCG GGGACTGCTG CCACCGGGGG CGTTCGTGCC GTTGGCCGAG CAGTCGGGTC TCATCCACCG CGTCACGCAC TTCGCGCTCG AGGAGTCGGT GCGTCAGCTC GCGGCCTGGC GCGCGCAGGG CGAGGCGGTG CCGGTCGCGG TGAACCTGTC CGCCCACGAC GTCGCGAGCC CCGCGGTGGT CGACATGATC GAGCTGCTGC TGGCGGAGCA CGAGGTCGAG GCCTCGCTGC TGGAGGTGGA GATCACCGAG ACCGCGCTGG TCGCGGACCG CACGCGCGTG GTGCCCGTGC TCGAGCGGCT CAGCGCGCTC GGGGTGCGCG TGGCGATCGA CGACTTCGGC ACGGGGACCA CGTCGATCTC GCAGATGCGC GACCTGCCGG TGGCCGAGCT GAAGATCGAC CGGCTCTTCG TCGCCGACCT CGGTGAGGGT GGGCGCGCGG GCTCGGAGGT GGTGGTGCAG GCCATGGTCG ACCTGGCCCA CTCGTTCGGG CTGCGCGTGG TCGCCGAGGG GGTGGAGGAC GAGGCGACGG CGCGCACGCT GGAGGAGCTG GGCGTGGACC GCGCGCAGGG CTACCTGTGG GCGCGTCCGG CGCCGGCGAG CGCGCTGCAC CCACCCGGAG GGCACTCACT TCACCCGATC GGGTGA
|
Protein sequence | MVLVGVALVL VTSAQMRGQA VRDGTAAASR MAAFAARAVP TASFVTGVLS ADERDAAAAA VAGFGDELVE LRLWSTDGRL MYSSDGATTG LPAADRLGRV MASGQPDAVV QPDVRAGGAA ADERTVIDVY VPVRVSDTAD PGDLADGAPD EAAGAVEVML DHTGTQQTLR TTTRTVTLVV VGSLVVLWLL LFQIVHSTSR RLRSTALENA RLALLDSLTG LPNRRLLSDQ MQRAIDRAAD DPEARVGLIL LDIDRFKDIN DTLGHDHGDE LLQQVAERLR HALRDDDVVA RLGGDEFAIL LPDVRTVANA ERLAMRVRGL FTRPFELSDI ALHVETSIGV ACLPDHAADA SALMRTADIA MYAAKHHRTG VSVYSPTADD SSPARLVLLG ELHQALESRG DPGAEPQLEL HYQPKIELAT QRTVGLEALI RWRHPARGLL PPGAFVPLAE QSGLIHRVTH FALEESVRQL AAWRAQGEAV PVAVNLSAHD VASPAVVDMI ELLLAEHEVE ASLLEVEITE TALVADRTRV VPVLERLSAL GVRVAIDDFG TGTTSISQMR DLPVAELKID RLFVADLGEG GRAGSEVVVQ AMVDLAHSFG LRVVAEGVED EATARTLEEL GVDRAQGYLW ARPAPASALH PPGGHSLHPI G
|
| |