| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2755 |
|---|
| Symbol | |
|---|
| ID | 9146663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 3063526 |
|---|
| End bp | 3065142 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | Carbohydrate kinase, FGGY-like protein |
|---|
| Protein accession | YP_003637840 |
|---|
| Protein GI | 296130590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.018415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.00000370584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCAGC AGCACGACGA GGACGCCCGC CGGGCCGCGG CGCGCGAGAG CATCGCGCAG
GGCCGGGCCA CGCTCGGCAT CGAGCTCGGC TCGACCCGCA TCAAGGCCGT CCTCGTGGGC
GAGGACCACG TGCCGCTCGC GAGCGGCGGC CACGCGTGGG AGAACCAGTA CGTCGACCGC
ACGTGGACGT ACTCGCTCGA CGCCGTGTGG GAGGGCCTGC GCGCCGCGGT CGCCGACCTG
CTCGACGACG CCGAGCGGCG GCACGGCGTG CGCCCCACGT CGCTCGCCGC GATCGGTGTG
TCCGCGATGA TGCACGGCTA CCTCGCGTTC GACGCGGACG ACGAGCTGCT CGTGCCGTTC
CGCACCTGGC GCAACACGTC CACCGGGCCT GCGGCGGCCG AGCTCACCGA GCTGCTCGGC
TACAACGTGC CGTTGCGCTG GTCGGTCGCG CACCTGTACC AGGCGGTCCT CGACGCCGAG
CCGCACGTCC CCGACGTCCG CTTCGTCACG ACGCTCGCCG GGTACGTGCA CTGGCGCCTG
ACGGGCCGCA GGGTCCTCGG CGTCGGCGAC GCGTCCGGCA TGTTCCCGGT CGACCCCGCC
ACGCGCGACT ACGACGCCGA CCTGCTCGCT CGCTTCGACG CGCACGTCGC GGACCGCCTG
CCGGTCGAGC ACCTCGCCGA CCTGCTGCCG GACGTGCTCG TGGCGGGCCA GGAGGCGGGG
ACGCTCACCG CCGAGGGCGC GGCGCTGCTC GACCCGAGCG GCGCGCTGCG CGCGGGCACG
CCGCTGTGCC CCCCGGAGGG TGACGCGGGC ACGGGCATGG TCGCGACGGC GTCCGTCGCG
CCGCGCACGG CCAACATCAG CGTCGGCACC AGCATCTTCG CGATGGTCGT GCTCGAGCAG
CCGCTGGCCA CCGTGCACCA CGAGATCGAC CTCGTGACGA CGCCCGCCGG TGACCTGGTC
GCGATGGTCC ACTGCAACAA CGGCGCGAGC GAGCTGGGGG AGTGGGCCGG CGTGTTCGGT
CGCTTCGCCA CCGCGCTCGG GTCCGACGCC GGCGCGGACG AGGTCTTCGG CGTGCTGCTG
CGCGAGGCCC TCGAGGGCGA GGCGGACGGC GGCGGCCTGC TCGCGTACAA CAACCTCTCC
GGCGAGCCGG TGACGGGCCT CGACGAGGGG CGCCCGTTGG TCGTCCGCAC GCCGGACAGC
CGCCTGACGC TCGGCAACTT CGTCCGCACG CAGGTCTACG CGGCCTTCGG CGCCCTCAGC
CTCGGCATGC GGATCCTCAC GGCCGAGGGC GTCGAGGTCG ACGCGATGTT CGCGCACGGC
GGCCTGTTCC GTACCGCGGG CGTGGCGCAG CGGCTGCTCG CGGCCGCCGT CGACACGCCC
GTGGCCGTCG GCCGCACCGC CGGTGAGGGC GGCGCCTGGG GCATCGCGGT GCTCGCGGGG
TACCTCGCGA GCGGCGCGAC GACCGACCTC GGGACGTACC TCACGGAACA GGTCTTCGCC
GACGCCGAGC TCGACGTCGC GCAGCCCGAC CCGGCCGACG TCGCCGGGTA CGCCGCGTGG
CTGGGGCGCT ACGAGGCCGG CCTGGCCGTC GAGCGCGCCG CCACCGAGGC GCTCTGA
|
|---|
| Protein sequence | MVQQHDEDAR RAAARESIAQ GRATLGIELG STRIKAVLVG EDHVPLASGG HAWENQYVDR
TWTYSLDAVW EGLRAAVADL LDDAERRHGV RPTSLAAIGV SAMMHGYLAF DADDELLVPF
RTWRNTSTGP AAAELTELLG YNVPLRWSVA HLYQAVLDAE PHVPDVRFVT TLAGYVHWRL
TGRRVLGVGD ASGMFPVDPA TRDYDADLLA RFDAHVADRL PVEHLADLLP DVLVAGQEAG
TLTAEGAALL DPSGALRAGT PLCPPEGDAG TGMVATASVA PRTANISVGT SIFAMVVLEQ
PLATVHHEID LVTTPAGDLV AMVHCNNGAS ELGEWAGVFG RFATALGSDA GADEVFGVLL
REALEGEADG GGLLAYNNLS GEPVTGLDEG RPLVVRTPDS RLTLGNFVRT QVYAAFGALS
LGMRILTAEG VEVDAMFAHG GLFRTAGVAQ RLLAAAVDTP VAVGRTAGEG GAWGIAVLAG
YLASGATTDL GTYLTEQVFA DAELDVAQPD PADVAGYAAW LGRYEAGLAV ERAATEAL
|
|---|
| |