| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_2474 |
|---|
| Symbol | |
|---|
| ID | 9146378 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2771185 |
|---|
| End bp | 2774415 |
|---|
| Gene Length | 3231 bp |
|---|
| Protein Length | 1076 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_003637561 |
|---|
| Protein GI | 296130311 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.719714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00582507 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGACGACGG CACCGACGAC CCGGCTCGTG GCGGCGCCCC TCGTCGAGCG CGCGGCGCTC
GGCGACGCGG CGCGCCCCGT CCTCGACGAC CTCCAGCGGG AGGTCGTCGA CCGCGTCGCC
GCCGGGGCGG ACCCGGTGCT GCTCGTCACG GGGGCCCCCG GGACGGGCCG CACGACCGTC
GCGCTCGAGG CCGCGGCCGC CGCCGTCGGT GCCGGGCTCG CGCCCGACGA CGTGCTCGTG
CTGGCCGCGA GCCGTCGTGC TGCCGCCGAC CTGCGGGACC GGCTCGCCGT CCGCCTGGGA
CGCACCGCAG GCCGACCGCT GGTGCAGACG GCACCGGCGG TCGCGTTCGC CGTGCTGCGG
GCGCGCGCCG GTGCGCTGGG CGAGCCCGCA CCGGTGCTGG TCTCCGGGCC GGAGCAGGAC
GTGGCGCTCG CCGAGCTGCT CGCGGGGCAC GCCTCCGGCG AGGTGCCCGG CCCCGCGTGG
CCGGCGTCGG TGCCCGAGGC GGCCCTCGGC GCGCGAGCGT TCCGCGACGA GCTGCGCGAC
CTGCTGATGC GAGCGGCCGA GCGTGGTCTG ACGCCCGCGG ACCTCGCGGC GCTGGGGCGT
CGCGAGCACC GCCCGGCCTG GGTCGCCGCC GCCCGCGTGT ACGAGGAGTA CCTCGACGTC
ATGGCGCTCG CGGCGGGGAC GCCCGACGCG GGTGAACGGC TCGACCCGGC CGTCGTGGTG
GACGCCGCCG TCGCCGCGCT GCGCGCGTGG GACGAGGAGG TGCCGGGCGT GCCCTGCCCG
CGCCGGCGCC TCGTCGTGGT CGACGACCAC CAGGAGAGCA CGACCGCGAC CGCGCGGCTG
CTGCGGGCGT TCGCGGACGG CGGTGCGCAC CTGCTGCTGC TCGGCGACCC CGACGTCGCG
GTCCAGACGT TCCGCGGTGC GCAGCCGACG CTGCTCGCCG CCGCTGCCGC GCCCACCGGT
CCCGGCGCGT CGGGCGCCGC GCACGTCGTG CTGCGGACCG TGTGGCGGCA GACCGGACCG
CTGCGCGAGG TGACCGCGCG GATCACGGAG CGCGTGCCCA CGTCGGGTAC GGTGGTCCAC
CGCCGGGCGT CCGTGCCGCC CGAGCGCGCG GACGGCCCGG CCCCCCGGGT CGCCGTGCTG
CCGAGCGCCG CGCAGGAGGC GGCGTGGGTC GCGTACCGGC TGCGTCGCGC GCACCTGCAG
GGCGGCGTGC CGTGGCAGGA GATGGCGGTG CTCGCACGCA CGGGCAGCCG CGCGACGGCG
CTGCGTCGCG CCCTCGCGCA GGCCGGGGTG CCCGTCCGCG TCGTCGGCAG CGACGTGCCG
CTGCGCGACG AACCGGCGGT GCGCCCGCTG CTCGACGCGG TACGCGTCGC GCTCGCCCCC
GACGAGCTCG ACGCGGAGGT CGCAGCGCGG TTGGCGTGCT CGCCGCTGGG TGGTCTCGAC
GCCGTCGGCC TGCGGCGGGT GCGCCGTGCG CTGCGCGCCG AGGAGCTCGC GGGTGGCGGT
GGGCGGTCGA GCGACGCGCT GCTCGTCGAG GCCCTGGCCG AGCCTGGGCG TACCGCGACC
CTCGAGCCGC ACGTGGGGCG TCCCGTGCAG CGTCTCGCCA CGCTCCTTCA GGCGGGCCGC
GACGCCGCGG CGGTGCCCGG TGCCGACGTG CAGGCCGTGC TCTGGGCGGT GTGGGACCGT
GCCGGGCTCG CCGAGCCGTG GCGGCGGTCA GCGCTCGCGG GCGGGGCCGG CGGCGAGCGG
GCCGACCGTG ACCTCGACGC GGTGCTCGCG CTGTTCCGTG CTGCCGAGAC GTTCGTCGAG
CGCATGCCGC AGGCGGCACC CCGTGCCTTC GTCGACTGGG TGATGGCGCA GGACCTCCCC
GCGGACTCGC TGGCGCCTGC CTCGCGGGCT GCGGGCGTCA GCGTGCTGAC GCCCGCCGGC
GCGGCGGGCG GCTCGTGGGA GGTCGTCGCG GTGGTCGGCG TCCAGGAGGG AGTCTGGCCC
GACCTGCGAC TGCGCGACTC GCTGCTGGGC GCGCAGACCC TGGTCGACCT GCTGGCGGGC
CGGGCGACCG CCGGCGGTCC GGGTGAGGAG CACGCGCGTG CCGCGCGCGC CGCGGTGCTG
GCCGACGAGC TGCGCGCCTT CGCGCTCGCG TGCTCTCGGG CGCGCACGCT GCTCCTGGTC
ACGGCGGTCG ACGACCAGGA CGCGACGCCC TCGCCGTTCC TCGACCTCGT GCAGCCGGGC
GCCGACGACG ACGGCCCTGA CCCGCGGCGG ACGAGCGCGC CGGCGCCCCT GGACCTGCGC
GGTCTCGTGG CGCGGCTGCG CGGGGTGCTC GAGCGCGCGG CGCTCGAGGG GCGGACGGAC
GAGCGGGCCG CGCGCACGCT CGCGCGGCTG GCCGCGCACG GCGTCCCGGG AGCCGATCCG
GCCTCCTGGT TCGGCCTGCC CGAGCCCTCG AGCGACGACC CCCTGTGGCC CGCCGAGGTC
AAGGTGCCCG TCTCGCCGTC GCGCCTCGAG ACCGCCCAGC GCTGCACCTT GCGCTGGGCG
CTCGAGGCCG CGGGCGGCAC GCCCGCGTCG TCCGCGCAGC AGTCGCTCGG CACGCTGGTC
CATGCGATCG CGCAGGACCA CCCGACGGCG GACCTGCCGA CCCTGCGGGC CGAGCTCGAC
CGGCGGGGGG CCGAGCTCGC GCTGGGCGAC GGCTGGCCCG CCGTCGCAGC ACGGCGCAAG
GCCGACGCGA TGCTGGAGCG ACTCGCGGCG TACCTGCGAG GAGCGGGCGA GCCGCTGCTC
GTCGAGGCGC CGTTCGCGGT CGAGACGGAC CGGGCGGTCG TGCGCGGGTC GATCGACCGC
GTCGAGCGTG CGCTCGTCGA GGGCGACGGC GCGAGCGGTG CCGTCGAGGT CGTGGACCTC
AAGACCGGGT CCCGCGTGCC GAGCGTCGCG CAGGCCGCCG AGCACGCGCA GCTGGGCGCG
TACCAGCTGG CGGTCGACGC AGGCGCCGTG CCCGGTCTCG CGCCGGGTAC GCACAGCGTC
GGAGCGCGGC TCGTGCACCT CGCGCACGGC TCCGGGGGCC CGACCCAGCG GCGTCAGGAG
GGGCTCGGCC CCGAGGAGAC GGGACCGAGC TGGGCGCGCG AGCTCGTCGA CGAGGTCGCG
GACCGCATGG CCGCCGCGAG CTTCGAGGCA CGCGGCAACG AGCTGTGCGA CAGGTGTCCC
GTACGGCGGG CGTGCCCGCT GCGCGGCGAG GGCGGGCAGG TGGTCGCGTG A
|
|---|
| Protein sequence | MTTAPTTRLV AAPLVERAAL GDAARPVLDD LQREVVDRVA AGADPVLLVT GAPGTGRTTV
ALEAAAAAVG AGLAPDDVLV LAASRRAAAD LRDRLAVRLG RTAGRPLVQT APAVAFAVLR
ARAGALGEPA PVLVSGPEQD VALAELLAGH ASGEVPGPAW PASVPEAALG ARAFRDELRD
LLMRAAERGL TPADLAALGR REHRPAWVAA ARVYEEYLDV MALAAGTPDA GERLDPAVVV
DAAVAALRAW DEEVPGVPCP RRRLVVVDDH QESTTATARL LRAFADGGAH LLLLGDPDVA
VQTFRGAQPT LLAAAAAPTG PGASGAAHVV LRTVWRQTGP LREVTARITE RVPTSGTVVH
RRASVPPERA DGPAPRVAVL PSAAQEAAWV AYRLRRAHLQ GGVPWQEMAV LARTGSRATA
LRRALAQAGV PVRVVGSDVP LRDEPAVRPL LDAVRVALAP DELDAEVAAR LACSPLGGLD
AVGLRRVRRA LRAEELAGGG GRSSDALLVE ALAEPGRTAT LEPHVGRPVQ RLATLLQAGR
DAAAVPGADV QAVLWAVWDR AGLAEPWRRS ALAGGAGGER ADRDLDAVLA LFRAAETFVE
RMPQAAPRAF VDWVMAQDLP ADSLAPASRA AGVSVLTPAG AAGGSWEVVA VVGVQEGVWP
DLRLRDSLLG AQTLVDLLAG RATAGGPGEE HARAARAAVL ADELRAFALA CSRARTLLLV
TAVDDQDATP SPFLDLVQPG ADDDGPDPRR TSAPAPLDLR GLVARLRGVL ERAALEGRTD
ERAARTLARL AAHGVPGADP ASWFGLPEPS SDDPLWPAEV KVPVSPSRLE TAQRCTLRWA
LEAAGGTPAS SAQQSLGTLV HAIAQDHPTA DLPTLRAELD RRGAELALGD GWPAVAARRK
ADAMLERLAA YLRGAGEPLL VEAPFAVETD RAVVRGSIDR VERALVEGDG ASGAVEVVDL
KTGSRVPSVA QAAEHAQLGA YQLAVDAGAV PGLAPGTHSV GARLVHLAHG SGGPTQRRQE
GLGPEETGPS WARELVDEVA DRMAAASFEA RGNELCDRCP VRRACPLRGE GGQVVA
|
|---|
| |