| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cfla_1967 |
|---|
| Symbol | |
|---|
| ID | 9145861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cellulomonas flavigena DSM 20109 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014151 |
|---|
| Strand | - |
|---|
| Start bp | 2188983 |
|---|
| End bp | 2190641 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_003637061 |
|---|
| Protein GI | 296129811 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.732438 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGTT ACGACGTCGT CCTCGCAGCG ACCGCCGACG GCGGGCAGGT CGGGGACCCC
GTGGTCAACA TCGCCATCTT CGGTGCGTTC GTCCTGGTGA CGCTCGTCAT CGTGTTCCGC
GCGTCGCGCA ACAACAAGAC GGCCGCCGAC TACTACGCGG CCGGTCGCTC CTTCACCGGT
CCGCAGAACG GCACCGCGAT CGCGGGCGAC TACCTGTCCG CCGCGTCGTT CCTCGGGATC
TGCGGCGCTA TCGCGATCTA CGGCTACGAC GGGTTCCTCT ACTCCATCGG GTTCCTCGTC
GCGTGGCTCG TGGCGCTCCT GCTCGTGGCG GAGCTCCTGC GCAACACCGG GCGCTTCACG
ATGGCCGACG TGCTGTCGTT CCGGCTCCGC CAGCGCCCGG TGCGCCTCGC GGCAGCGATC
TCGACGCTCG CGGTCGTGTT CTTCTACCTG CTGGCGCAGA TGGCCGGCGC GGGCGGCCTC
GTCGCGCTGC TGCTCGGCAT CGACGGTGTC GCGGGCCAGG GTCTGGTCAT CGCCGTCGTG
GGCGCGCTGA TGATCCTCTA CGTCCTGGTG GGCGGCATGA AGGGCACCAC CTGGGTGCAG
ATCATCAAGG CGATCCTGCT CATCGCGGGC GCCGGGATCA TGACGATCTG GGTGCTCGCG
AGGTACGGGT TCGACCTGTC GGCGCTCCTG CAGGGCGCGA TCGACGCCGG GGGCGAGGAA
GGCAGCAAGC TCATCGAGCC GGGCAAGCAG TACGGCGCGT CCGCCCTGAC GCAGCTCAAC
TTCCTGTCGC TGGCCCTCGC GCTGGTCCTC GGCACGGCCG GTCTGCCGCA CGTGCTCATG
CGCTTCTACA CGGTGCCGTC CGCCAAGGAG GCCCGGCGCT CGGTCGTCTG GGCGATCTGG
CTCATCGGGA TCTTCTACCT GTTCACGCTC GTGCTGGGCT ACGGCGCCGG AGCGATCGTC
GGCCCGGAGA CGATCATGGC CTCGCCCGGC AAGGCGAACT CGGCGGCACC CCTGCTCGCC
TACGAGCTCG GCGGGGTCTT CCTGCTCGGC ATCATCTCGG CCGTCGCGTT CGCCACGATC
CTCGCGGTCG TCGCCGGCCT GACGATCACC GCCGCGGCGT CGTTCGCGCA CGACATCTAC
GCGTCGGTCA TCAAGAAGGG GCAGGTCGCC CCCGACGGCG AGGTGCGCGT CGCGCGGATC
ACGGTGCTGG TCATCGGTGG TCTGGCCATC GTCGGCGGCA TCTTCGCCAA CGGCCAGAAC
GTCGCGTTCC TCGTGGCCCT CGCCTTCGCG GTCGCCGCGT CGGCCAACCT GCCGACGATC
ATCTACTCGC TGTTCTGGAA GCGGTTCAAC ACCGCCGGCG CGCTGTGGAG CATGTACGGC
GGGCTCATCT CGTGCGTGCT GCTCATCGCC TTCTCGCCGG TCGTGTCCGG CAAGGTCGAC
CCGACCACCG GTGCCAGCCT GTCGATGATC CGCGACACGT CCATCGACTT CGCGATCTTC
CCTCTCGAGA ACCCGGGCAT CATCTCGATC CCGCTCGCGT TCCTGCTCGG GATCGTCGGG
ACGCTGCTGT CCAAGGAGCA GCCGCACCCG GAGAAGTTCG CCGAGATGGA GGTCCGCTCG
CTCACGGGTG CCGGGGCCGA GAAGGCCTCG GTGCACTAG
|
|---|
| Protein sequence | MSRYDVVLAA TADGGQVGDP VVNIAIFGAF VLVTLVIVFR ASRNNKTAAD YYAAGRSFTG
PQNGTAIAGD YLSAASFLGI CGAIAIYGYD GFLYSIGFLV AWLVALLLVA ELLRNTGRFT
MADVLSFRLR QRPVRLAAAI STLAVVFFYL LAQMAGAGGL VALLLGIDGV AGQGLVIAVV
GALMILYVLV GGMKGTTWVQ IIKAILLIAG AGIMTIWVLA RYGFDLSALL QGAIDAGGEE
GSKLIEPGKQ YGASALTQLN FLSLALALVL GTAGLPHVLM RFYTVPSAKE ARRSVVWAIW
LIGIFYLFTL VLGYGAGAIV GPETIMASPG KANSAAPLLA YELGGVFLLG IISAVAFATI
LAVVAGLTIT AAASFAHDIY ASVIKKGQVA PDGEVRVARI TVLVIGGLAI VGGIFANGQN
VAFLVALAFA VAASANLPTI IYSLFWKRFN TAGALWSMYG GLISCVLLIA FSPVVSGKVD
PTTGASLSMI RDTSIDFAIF PLENPGIISI PLAFLLGIVG TLLSKEQPHP EKFAEMEVRS
LTGAGAEKAS VH
|
|---|
| |